Methylovorus glucosotrophus: Msip34_0798
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Entry
Msip34_0798 CDS
T00943
Name
(GenBank) RNA polymerase, sigma-24 subunit, ECF subfamily
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
mei
Methylovorus glucosotrophus
Pathway
mei02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
mei00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Msip34_0798
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mei03021
]
Msip34_0798
Transcription machinery [BR:
mei03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Msip34_0798
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_ECF
Sigma70_r4
TetR_C_22
LPD5
Motif
Other DBs
NCBI-ProteinID:
ACT50046
UniProt:
C6XBX1
LinkDB
All DBs
Position
complement(829215..829757)
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AA seq
180 aa
AA seq
DB search
MSQPSSILENLYVHHHGWLQGWLRRRLGNGADAADLAHDTFVRLISGRTQRRFDSVAEAR
AYLRTTAQHLCINLWRRREIEQAWLETLAAMPAAHHPSAERQAMVLQALEEVTAMLGQLP
PKAARAFTLAVICDMTDDEVGLALGVSGRMVRKYVAQAMLGCLTLRAQQTMRELTSEPAG
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
ttgagccagccatcttctattcttgaaaatctttatgttcatcatcatggctggctgcag
gggtggctgcgccgtcgcctgggcaacggcgccgatgccgccgaccttgcacatgacacc
tttgtcagactgatcagcggtcgcacgcaacgacgttttgacagcgtggccgaggcaaga
gcctatctgcgcactaccgcacagcatctatgcatcaacctgtggcgtcgccgcgagatt
gagcaagcctggctggaaacactggcagccatgcctgccgcccatcacccttctgcggaa
cgccaggccatggtgttgcaggcactggaagaagtcaccgccatgctcggccagctgccc
cccaaagccgctcgcgcgttcactctggccgttatctgcgacatgaccgacgacgaagtc
gggttagcgctgggtgtgtctggccgcatggtccgaaaatacgtggcacaggcgatgctg
ggctgcctgacgctgcgcgcgcagcagaccatgcgcgagttgactagcgagcctgcaggc
tga
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