Methylovorus glucosotrophus: Msip34_1263
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Entry
Msip34_1263 CDS
T00943
Name
(GenBank) excinuclease ABC, B subunit
KO
K03702
excinuclease ABC subunit B
Organism
mei
Methylovorus glucosotrophus
Pathway
mei03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mei00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Msip34_1263
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mei03400
]
Msip34_1263
DNA repair and recombination proteins [BR:
mei03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Msip34_1263
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Msip34_1263
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
Kinesin
DALR_1
Motif
Other DBs
NCBI-ProteinID:
ACT50509
UniProt:
C6XD84
LinkDB
All DBs
Position
1360772..1362808
Genome browser
AA seq
678 aa
AA seq
DB search
MIVTFPNSRYQLHQPFPPAGDQPAAIEKIITGIEQGMQYQTLLGVTGSGKTYTMANVIAR
TGRPAMVMAPNKTLAAQLYSEFREFFPNNAVEYFVSYYDYYQPEAYVPSRDLFIEKDSSI
NDHIEQMRLSATKSLLEREDSIIVATVSAIYGIGDPGEYHGMVLHIHQGMKISQRDIVNK
LITMQYDRNDFDFSRGAFRVRGDVVDVFPSENSETAVRISLFDDEIETIQLFDPLTGQVF
NKIHNFRIFPSSHYVTAREATVRAMETIKQELRDRVDFFIKNNKLVEAQRIEQRTRFDLE
MLNEIGFCKGIENYSRHLTGRSPGDAPPTLIDYLPANALMIIDESHVTIPQIGGMYKGDR
ARKENLVDYGFRLPSALDNRPLRFEEFERIMRQTVFVSATPADYEATHQEQVVEQVARPT
GLIDPEITVKPADTQVDDLLSEIKLRVAVGERVLATTLTKRMAEDLTDYLSEHGVKVRYL
HSDIDTVERVEIIRDLRLGEFDVLVGINLLREGLDIPEVSLVAVLDADKEGFLRSERSLI
QTAGRAARNLNGKVIFYANNITRSMKLAMDETQRRRTKQMAFNEAHGIVPKGVTKRIKDI
IDGVYDKDDAKRERQAAQDQASYEALSEKQIIKEMKRLEKSMHDSAQNLEFEKAAEFRDQ
LKKLKAKFYGTDVPDILP
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
gtgattgttactttccccaatagtcgataccagcttcatcagcctttccctcccgccggc
gaccagcctgctgccatagaaaaaatcatcaccggtatagagcagggcatgcaataccag
accctgcttggggtaaccggctccggtaaaacctataccatggccaatgtgattgcccgt
accggccggccagccatggtcatggcgcccaacaagacgctggctgcgcagttgtattcg
gagtttcgcgagttctttccgaataatgcggtggagtatttcgtgtcctattacgattac
tatcagcctgaggcctatgtgccctcgcgcgatctgtttatcgaaaaagactccagcatc
aatgatcacattgagcagatgcggctctcagcgaccaagtcgctgctggagcgcgaagac
agcattatcgtggccaccgtctcggccatttacggcatcggggatccaggtgagtaccat
ggcatggtgctgcatattcatcagggcatgaagatcagtcagcgcgacattgtgaacaag
ctgattacgatgcagtacgaccgtaatgactttgacttctcacgcggtgcctttcgggtg
cgtggcgatgtggtggatgtgttcccatcagaaaacagtgagacggccgtccgcatcagc
ctgtttgacgatgaaatcgaaaccatccagctgtttgatcccctgaccggacaagtattc
aacaagattcacaatttccgcatcttcccttccagtcattatgtgacagcgcgggaagcc
accgtgcgggcgatggaaaccatcaagcaggaactgcgtgatcgcgtggacttctttatc
aagaacaacaagctggttgaggcgcaacgcatagagcagcgcacgcggtttgacctggaa
atgctcaatgaaatcggtttctgcaaggggattgaaaactacagccgccatcttaccggc
cgctccccgggcgatgcgccgccgacactgattgattatctgccagccaatgccttgatg
atcattgatgaaagccacgtgactattccgcagatcggtggcatgtacaagggcgaccgc
gcacgcaaggaaaacctggtggattatgggttccgcttgccttcggcgctggataaccgg
ccgctgcgatttgaagagtttgagcgcatcatgcgacaaaccgtgtttgtcagcgccacg
cctgccgactatgaagccacgcaccaggagcaggtagtggagcaggtggcgcggccgact
ggcctgatcgacccggaaatcaccgtaaaaccggcagatacccaggtggacgatctgctc
tcggaaatcaagctgcgggtggccgtgggcgagcgcgtgttggcgacgaccctgaccaag
cgcatggccgaggatttgaccgactatctgtctgagcacggcgtgaaggtgcgctatctg
cactcggacattgataccgtggaacgggtggaaatcattcgcgacttgcgccttggcgag
tttgatgtactggtcggcatcaacctgctgcgtgaggggctggatattcccgaagtttct
ctggttgctgtgctggatgctgacaaggaaggtttcctgcggtcagaacgttccctgatt
caaacggcaggccgcgctgcgcgtaaccttaatggcaaggtgatcttttacgccaataac
attacccggtcgatgaagctggccatggatgaaacgcaacggcgtcgtaccaagcagatg
gcattcaatgaggcacacggtatcgtgcccaagggggtgaccaagcgcatcaaggatatt
attgacggcgtgtatgacaaggatgacgctaaacgcgaacggcaggctgcgcaggatcag
gccagctatgaagccctgagcgaaaaacagatcatcaaggaaatgaaacgcctcgaaaaa
tccatgcatgacagcgcgcaaaacctggagtttgagaaagcagcagaattccgggatcag
ctgaaaaaactcaaggccaaattctacggaacagatgttcccgatattctgccttga
DBGET
integrated database retrieval system
