Methylovorus glucosotrophus: Msip34_1523
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Entry
Msip34_1523 CDS
T00943
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mei
Methylovorus glucosotrophus
Pathway
mei03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mei00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Msip34_1523
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mei03019
]
Msip34_1523
03400 DNA repair and recombination proteins [BR:
mei03400
]
Msip34_1523
Enzymes [BR:
mei01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Msip34_1523
Messenger RNA biogenesis [BR:
mei03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Msip34_1523
DNA repair and recombination proteins [BR:
mei03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Msip34_1523
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
ACT50768
UniProt:
C6XDZ3
LinkDB
All DBs
Position
1632210..1634039
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AA seq
609 aa
AA seq
DB search
MSHQNAQEVLESIFGYNQFRGPQQDVVEHLAQGGDALVLMPTGGGKSLCYQIPALLRPGL
AIVVSPLIALMQNQVEALQQLGVEAAFLNSSLQADEAYQLQQRILSGDIKILYVAPERLM
LSSFLSLLDEVQAHIGLALFAIDEAHCVSQWGHDFRPEYRQLTILHERFPDVPRVALTAT
ADAPTRAEIIERLNLEHARQFISSFDRPNIRYRIVLKNNARQQLEQFLETEHPNDAGIVY
CLSRRKVDETAAWLQSRGWNALPYHAGLDAATREKHQRQFLREEGIIMVATIAFGMGIDK
PNVRFVAHLDLPKSMESYYQETGRAGRDGLQANAWMAYGLGDVVSMRQMLDSGDAPEERK
RVERQKLDALLGFCEATGCRHQGILRYFGEAHPGDCAQCDNCLTPPDTWNATEAARMALS
CVYRTGQRFGTGHLIDILIGKVTPQVERFNHQQVSTFGIGKQYSVAQWSSVFRQLAASGL
LEVDIAAYGGLRLTEAARPVLRGECEVWQRQDPTPAGNRMSKAERSSRAKEAFAGAQDDP
LWQALRAKRMELAKEQGVPPYVIFHDSTLLEILNRKPQSLTELGQIGGVGQAKLARYGDD
FLKVLEDHA
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgagccatcaaaacgcccaagaggtactggaaagtatcttcggctacaaccagttccga
ggcccccagcaagatgtcgttgaacatctggcgcaagggggcgatgcgctggtcttgatg
ccgacgggtggcggcaaatcgctgtgttatcagatcccggcgctgttgcggcccggcctg
gcgattgtcgtgtcaccgctgatcgcgctcatgcagaatcaggtcgaggcattgcagcaa
cttggcgtggaggcagctttcctcaactccagcctgcaggcggatgaagcctatcaactg
cagcaacgcattctttctggtgacatcaagattctgtacgtggcgccggaacgcctgatg
ctgagcagctttctgtcattgctggacgaagtgcaggcgcacatcggccttgcgctgttt
gccattgatgaagcgcattgcgtatcgcaatgggggcatgatttccgtcctgaataccgt
cagctcacgatattgcatgagcgattccccgatgtgccacgggtagccctcaccgccaca
gcggacgcccctacccgcgccgaaatcatcgagcggcttaaccttgagcatgcgcgccag
ttcatctccagctttgaccggccgaatattcgctaccgcatcgtgctgaaaaacaatgcg
cgccagcagctagagcaattcctcgaaaccgagcaccccaacgacgcaggcattgtctat
tgcctgtcgcggcgcaaggtggatgaaaccgccgcctggctgcaaagccgcggctggaat
gccctgccttaccatgctggccttgatgccgcgacgcgagaaaagcatcaacgccagttc
ctgcgcgaagaaggcatcatcatggtggcgaccatcgcctttggcatgggcatagacaaa
cccaatgtgcgcttcgtggcgcatctggacctgccgaaaagcatggaaagctattatcag
gaaaccggccgcgccgggcgcgatggcctgcaagccaatgcctggatggcctatggactg
ggcgatgtggtttccatgcggcagatgctggactcaggcgatgcgccggaagagcgcaag
cgcgtggagcggcagaaactggatgccctgctcggcttttgcgaagccaccggctgccgc
catcagggcatattgcgctactttggcgaagcgcaccctggcgattgcgcccagtgcgac
aactgcctgacgccgcctgacacctggaatgccaccgaagctgcgcgcatggcgctttcc
tgcgtgtatcgaaccggccagcgttttggcacggggcatctgattgatatcctgatcggc
aaagtgacgccgcaagtggagagattcaaccatcagcaagtcagcacctttggcataggc
aagcaatacagcgtggcgcaatggagcagcgtattccggcaactggccgccagtggcttg
cttgaagtcgatatcgcggcctatggtggcctgcgcctgaccgaggcggcacggcccgta
ttacgcggtgagtgcgaagtatggcaacgtcaggacccgacgcccgctggcaaccgcatg
agcaaggccgagcgcagctcacgcgccaaagaagcctttgcaggtgcgcaggatgatccc
ttatggcaagcgctgcgcgccaaacgcatggagcttgccaaggagcaaggcgtaccacct
tatgtcattttccatgacagcactttgctggaaattctcaaccgcaaaccgcaaagcctg
accgaactgggccagataggcggcgtgggacaagccaagctggcacgctacggcgatgat
ttcctgaaagtgctggaagaccatgcctga
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