Methylovorus glucosotrophus: Msip34_2877
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Entry
Msip34_2877 CDS
T00943
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mei
Methylovorus glucosotrophus
Brite
KEGG Orthology (KO) [BR:
mei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mei03032
]
Msip34_2877
03400 DNA repair and recombination proteins [BR:
mei03400
]
Msip34_2877
Enzymes [BR:
mei01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Msip34_2877
DNA replication proteins [BR:
mei03032
]
Prokaryotic type
DNA Topoisomerases
Msip34_2877
DNA repair and recombination proteins [BR:
mei03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Msip34_2877
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Zn_ribbon_Top1
Toprim_4
DUF6468
DUF7340
Integrase_1
DUF34_NIF3
Zn_ribbon_recom
Motif
Other DBs
NCBI-ProteinID:
ACT52101
UniProt:
C6XEP4
LinkDB
All DBs
Position
pMsip01:complement(26286..28058)
Genome browser
AA seq
590 aa
AA seq
DB search
MSKTLIIVESPTKAKKLSEYLGSEYLVKASFGHVRDLPTSNGEIGYHPETFEPIYEVTEK
ARTTIKVLKAAVKECDRVLLATDPDREGEAISWHLAELLGLRKRERVKFHEITASAILKA
INTPSAIDTSLVRAQEARRIIDRQVGWLVSGPLTRKIGQRASAGRVQSPALALVVERERE
ILAFKKEAFFTVEAEFSEEWGAVWPSDEQQCKDRSVAETIAESKQFSVLEYDLSKLHEDP
PPPFRTSKLLQAASVVLGFDPKRTMDLAQSLFQKHGAISYHRTDESNISDDAYGMIVEYG
QERNYPMSSEKRTWKGVVAAQEAHEAIRPSDMNYQPDETMTADEAALYRLIHSRAVASQM
EPAEYTVATATLSNEQGIKFKAQSKSLCKPGWRVLAVQDEEHDDNPSLSHIPDLSVGQIL
HSSNVTVCEHSTRPPKRYTKASLTNALERLGIGRPATYASMVDGLTDRSYVQVVERFLTP
EPVGFAIYDALKGAFSFIETEYTRGMESDLDLIVKGDKTYRSVVSSKYSDLTTELASFGG
AEIPRPAPSTVGSCPKCGKGMVQRTGSRGPFLGCSGYPKCKETQQLPKGA
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaaactctcatcattgttgaatcgccaactaaggccaagaaactctccgagtac
cttggctctgaatatcttgttaaagccagtttcggtcatgttagagatttacctaccagc
aatggcgagatcggctatcacccggaaaccttcgaacccatatacgaggtcaccgaaaaa
gcgagaaccaccatcaaggttctcaaggctgcggtaaaagaatgtgaccgtgtgcttctt
gccactgatccggatagagaaggggaggcaatttcatggcaccttgcagaacttctcggg
ctgcgtaaacgcgagagagtaaaattccatgaaattactgccagcgccattctgaaggca
atcaatactccttccgcgattgatacgtcactggtgcgtgctcaggaagcccgccgcatt
attgatagacaagttggctggcttgtttcaggaccgcttacacggaaaattggtcagcgt
gcgagcgctggccgggtgcaatctcctgctttggctttggtggtcgagagagagcgcgag
atcctcgcgtttaaaaaagaagcttttttcacggttgaggcagaattcagcgaagaatgg
ggagccgtttggccttccgatgagcagcagtgtaaggatcgctcagtcgcggaaacgatt
gcagagagcaagcagtttagtgtcctcgaatacgaccttagtaaacttcatgaagatccg
ccaccgccgttccgaacatcaaaattgctccaagcagcaagcgtagtcttgggtttcgac
ccaaaacgcactatggatctggcacagtccttgttccagaaacatggagcaatcagctat
caccgtaccgacgagagcaacatatctgatgacgcctatggaatgatcgtggagtatggc
caggagcggaattatccaatgtccagcgaaaaacgcacctggaagggggttgtggcggct
caggaagcccatgaggcaatcaggccatcggatatgaattatcaaccagatgagacaatg
actgctgatgaggcagcattgtatcgtttaattcattcacgagcggtggcttcccaaatg
gagcctgccgaatacactgtagctaccgctacgctctcaaatgagcagggtattaaattc
aaagcgcagtctaaatcactttgcaaaccaggttggcgcgtcctcgccgttcaagatgag
gaacatgatgacaatccttcgctgagtcatatcccagacctcagtgttgggcaaatactt
cattcatctaatgtaacggtttgcgagcattctactcgaccgccaaagcgttatacgaaa
gcctcgcttactaatgcccttgaaagacttggcattggccgacctgccacctatgcgagc
atggtcgatgggcttacagatcgctcatatgtccaggtggttgaacgtttcttaacgcct
gagcctgtaggattcgcaatctatgatgctttgaaaggcgcgttctcgtttattgaaacc
gagtacacacgagggatggaatccgatctggatctcatcgtcaaaggggataagacctac
agatccgtggtgagcagtaagtattctgatttaaccacggaacttgcaagttttggcggt
gctgagattccacggccagcaccatctaccgttggttcctgccctaaatgcggcaaaggc
atggtgcaacgtactggatctaggggccccttccttggctgctctggataccctaaatgc
aaggaaacgcaacaactcccgaaaggtgcataa
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