Methyloprofundus sp. INp10_methR40d: methR_P0096
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Entry
methR_P0096 CDS
T07025
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
mein
Methyloprofundus sp. INp10_methR40d
Pathway
mein03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mein00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
methR_P0096
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mein03400
]
methR_P0096
Enzymes [BR:
mein01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
methR_P0096
DNA repair and recombination proteins [BR:
mein03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
methR_P0096
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
BCG62455
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All DBs
Position
complement(108097..108870)
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AA seq
257 aa
AA seq
DB search
MRIITINTNGIRAAERKGFFTWLAQQNADFVCIQETKAQPEQLTAPTFAPTGYHCHYHSA
IKKGYSGVAIYSKQQPDNIIEGMGFSDIDNEGRYLEFQVGKLSVISLYLPSGSSKKERQD
FKYSVMDRFMPYLQERSKNGRDYVICGDWNIAHKEIDLKNWKPNQKNSGFLPDERAWLDR
LFEQEPWHDAFRIINQEPDQYTWWSNRGQAWAKNVGWRIDYQVISEQLKDKVQSASIYKE
QRFSDHSPLIIDYNYTP
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgcgcattatcacaataaacaccaatggaatccgggctgcagaacgcaaaggttttttt
acttggctagcacaacaaaatgcagatttcgtctgcatacaggaaaccaaggcacaaccc
gagcaactcaccgcccctacatttgcacctacaggctatcactgccactatcatagtgcg
ataaaaaaaggctatagtggagtcgccatctatagcaaacaacaacccgataatattatt
gaaggtatggggttttctgatatagacaatgaagggaggtatttagagtttcaagtaggc
aaactaagcgtcatttctttatacttgccttcaggatcatctaaaaaagaacgccaagac
tttaaatatagtgtcatggatcgctttatgccttatttacaagagcgctctaaaaatggc
cgcgactatgtcatttgtggcgactggaatattgcccataaagaaattgatttaaagaac
tggaagcccaatcaaaaaaattcgggttttttacccgacgagcgcgcttggctagacagg
ttatttgaacaagaaccgtggcatgatgcctttagaataatcaaccaagagcctgaccaa
tacacatggtggtcaaatcgcggacaagcttgggctaaaaacgttggttggcgcattgac
tatcaggttattagtgagcaattaaaagacaaagtacaatcagcatcaatctataaagaa
cagcgcttttcggatcattcgccgctaattatagattacaactacacaccttaa
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