KEGG   Methyloprofundus sp. INp10_methR40d: methR_P0348
Entry
methR_P0348       CDS       T07025                                 
Name
(GenBank) ribonuclease D
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
mein  Methyloprofundus sp. INp10_methR40d
Brite
KEGG Orthology (KO) [BR:mein00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:mein03016]
    methR_P0348
Enzymes [BR:mein01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     methR_P0348
Transfer RNA biogenesis [BR:mein03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    methR_P0348
SSDB
Motif
Pfam: DNA_pol_A_exo1 HRDC RNAseD_HRDC_C
Other DBs
NCBI-ProteinID: BCG62698
UniProt: A0A7R6W5L7
LinkDB
Position
386739..387896
AA seq 385 aa
MNEIQFVDSVEELQVLCQKMQQEPWFALDTEFLREKTYYPKFCLLQIATLEWVACVDPIA
LEGQLDELFAIINDPNIVKVIHSCRQDVEIFYQLTGKLPAPVYDTQLVAPILGYQENPGY
AMLVSGFLNINLSKLHTRTDWSQRPLSVEQMQYAADDVIYLAQIYQMMQEKLTELGREDW
LQEDFEQLMNPDLYDIPPADAWLKIRGKNKLTGKQLAIVQVLAEWREEAAKKSDKPKNWI
LRDELILDMSKLQPTNMQAIAKIRGINDGFVRRSGQQLCELIKKAQDMPGLKLKTKGNSA
KKTPQQEAILDILTGIVRLRADENSLNPVMLATRKDLEQLLLNAETCSLLHGWRYSMVGQ
ELEEILLGKLTLSMDKSNLSINALA
NT seq 1158 nt   +upstreamnt  +downstreamnt
atgaatgaaattcagtttgtagattcagtagaggaattacaggttctttgccaaaaaatg
cagcaagaaccatggtttgcacttgatactgaattcctacgggaaaaaacgtattaccca
aaattttgtttgctgcaaatcgctactttagaatgggtggcctgtgttgacccgattgct
ttggaaggccagttagatgagttgtttgcaatcattaatgaccctaatattgtaaaagtg
atccattcttgtcgccaagatgtggaaatattttaccagttaacaggtaagttaccagcc
cctgtttatgatacccagttagtcgcacctatattgggttatcaagaaaaccctggctat
gcgatgctggtttcaggttttttgaatattaacctgagcaaattgcatacacgtactgac
tggagccaacgccccttatcggtagagcaaatgcaatatgctgcggatgatgtgatttat
ttggcacaaatttatcagatgatgcaagaaaagttgactgaattagggcgtgaagattgg
ttgcaagaagactttgagcaattaatgaatcctgatttgtatgatattccaccagcagat
gcttggttaaaaattagaggtaaaaataaactaacagggaaacaacttgcgattgtgcaa
gtactggctgaatggcgtgaagaagccgctaaaaagagtgataagcctaaaaactggatc
ttacgtgatgagttaatcttggatatgtcaaagttacaacctactaatatgcaagcgatt
gccaaaataagaggcattaatgatggttttgttaggcgtagtggacaacagttgtgtgaa
ctgattaaaaaagcacaggatatgccaggcttgaaattaaaaacgaagggcaatagcgct
aagaaaacaccgcagcaagaagctattctagatattttaacgggtatagtgcgtttacgt
gcagatgaaaactccttgaatcctgttatgttagcaacgcgtaaagatttagagcagttg
cttttaaatgctgaaacttgttccttgttacatggctggcgttacagtatggtcgggcaa
gaactagaggaaattttattgggtaagctgactttatctatggataaaagtaatttatcg
atcaatgcattagcgtaa

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