Methyloprofundus sp. INp10_methR40d: methR_P1533
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Entry
methR_P1533 CDS
T07025
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mein
Methyloprofundus sp. INp10_methR40d
Pathway
mein03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mein00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
methR_P1533
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mein03019
]
methR_P1533
03400 DNA repair and recombination proteins [BR:
mein03400
]
methR_P1533
Enzymes [BR:
mein01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
methR_P1533
Messenger RNA biogenesis [BR:
mein03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
methR_P1533
DNA repair and recombination proteins [BR:
mein03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
methR_P1533
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
RecQ_Zn_bind
Helicase_C
HRDC
HTH_40
ResIII
Motif
Other DBs
NCBI-ProteinID:
BCG63802
UniProt:
A0A7R6W7L9
LinkDB
All DBs
Position
1714004..1716145
Genome browser
AA seq
713 aa
AA seq
DB search
MQQSQNKETSALAILQTVFGYEEFRGQQAEIIEQLIIGNSAVVLMPTGGGKSLCYQIPAM
VRDGVGIVISPLIALMEDQVNALHQLGVQAAYLNSTLNYEQVQIIEQQLRRNELDLLYVA
PERLTSERTLQLFSQIQIALFAIDEAHCVSQWGHDFRADYLQLSLLAERFPIIPRIALTA
TADQRTREEIITRLSLTESKLFIGGFDRPNIRYRIVEKNNARQQLLALIKAEHMGDAGIV
YCLSRKKVESTAKWLQEKGVDAYPYHAGLSHQLRKEHQHKFLMSEGVVIVATVAFGMGID
KPNVRFVAHLDLPKSIEGYYQETGRAGRDGEPANAWMAYGLQDVIMLRQMLQGSDADETH
KRVELHKLDAMLGLCEQVSCRREVLLSYFGETQAESCGNCDTCLEPVETWDGTIAAQQAL
SCIYRTEQRFGVNYLMEVLLGKDTDRMRSFGHDKQSTFGIGKELTETQWRSVFRQLVVKG
LVDVDFEYGALKLNPSCRPLLRGETQIRFRKELAKAKSKKTKVKRGDFVKHSDNVLWDAL
RAKRRELADAQDVPPYVIFNDASLTEMVETVPKNEQQFAQISGVGERKLELYADDFLSVI
NSIHISQEKNSEFTETVDETVILFNAGFSVQKIAVQRELKDTTIYGHLAQGIAQGRVNLK
DVVELSEQEISTIQDEVLSLAAAPEDPLKPVYDALNAAYDYGIIRCVKAGMEL
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
gtgcagcaatcacagaataaggaaacgtcggcacttgctattttgcagactgtttttggg
tatgaggaatttcgagggcaacaagcggaaattattgagcaattaattattggcaatagt
gcggtggtcttaatgccgacaggcggtggtaaatcactttgctatcaaattcccgcgatg
gttcgtgatggcgtagggattgtgatttcccccttgattgctttaatggaagatcaagtg
aatgctttgcaccaattaggagtgcaggcagcttatttaaattcgactttgaactatgag
caagtacaaatcattgagcagcaattacgccgtaatgaactggatttactttatgtcgct
ccggaacgcttaacctcagaacgaacattacaattatttagtcagatacagattgcttta
tttgccattgacgaagcacactgtgtatcgcaatgggggcatgactttcgtgctgattat
ttgcagttatccttattggccgagcgttttccaattattccacgtattgcgttaaccgca
acggctgaccagcgtacccgtgaagaaattattacccgtttaagcttaactgagtccaag
ttatttattggtgggtttgaccgacctaatattcgctatcgcattgtcgaaaagaacaat
gcacggcagcaattgttggcgttgattaaagcggagcatatgggtgatgcaggtattgtt
tactgtttatcgcgtaagaaagttgagtctactgctaagtggctacaagaaaaaggtgtt
gatgcttacccttatcatgcgggtttatctcaccaactacgcaaggagcatcagcataaa
tttttaatgtctgaaggggtggttatcgttgccacggttgcctttggcatgggtattgac
aagcccaatgtacgttttgttgcgcatttggatttacccaaaagtatcgaaggttattac
caagaaacgggcagagcagggcgtgatggtgaacctgccaatgcatggatggcctatggt
ttacaagatgtgattatgttgcgacaaatgttgcaaggttcagatgctgatgaaacccat
aaacgggtggaactacataaactagatgcgatgttggggttatgcgagcaagtatcttgt
cggcgtgaagtattgttaagttattttggtgaaacccaagctgaatcttgtggtaattgt
gatacctgtttggagccagtggaaacttgggatggcaccattgcagcgcagcaagcttta
tcatgtatttatcgtactgagcaacgctttggcgttaattatttaatggaagtgttgtta
gggaaagacaccgatcgtatgcgcagttttgggcatgataaacaaagtacttttggtatt
ggtaaggaattaactgaaacccagtggcgttccgtctttaggcaattagtggtaaaaggt
ttggtggatgttgattttgagtatggcgcgttgaaactcaacccgagttgtcggccatta
ttacgtggtgaaacccaaattcgtttccgtaaagaattagccaaagctaaaagcaaaaaa
accaaggttaaacgcggtgattttgtcaaacatagtgataatgttttatgggatgcatta
cgcgcaaaacgtcgtgaattagcagatgcacaagatgtaccaccgtatgtgatttttaat
gatgccagcttaacggaaatggtcgaaacggtaccaaaaaatgaacagcagtttgcgcaa
atttcaggagtaggtgagcgtaaacttgaactgtatgccgatgactttctcagtgtcatt
aatagtattcatattagccaagaaaaaaactctgaatttacggaaacggtagatgaaacg
gtgatactgtttaatgctggtttttcagtgcaaaaaattgcagtgcaaagggagttgaaa
gacaccacaatctatggtcatttagcgcaaggtattgctcaagggcgggttaatttaaag
gatgtcgttgaattaagtgaacaagaaattagcaccatacaagatgaagttttaagtttg
gcagcggctcccgaagatcctttaaagcctgtttatgatgcactcaatgcagcatatgac
tatggcattattcgttgtgtgaaagcgggcatggaactttaa
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