Methyloprofundus sp. INp10_methR40d: methR_P1572
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Entry
methR_P1572 CDS
T07025
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mein
Methyloprofundus sp. INp10_methR40d
Pathway
mein03030
DNA replication
mein03430
Mismatch repair
mein03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mein00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
methR_P1572
03430 Mismatch repair
methR_P1572
03440 Homologous recombination
methR_P1572
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mein03032
]
methR_P1572
03400 DNA repair and recombination proteins [BR:
mein03400
]
methR_P1572
Enzymes [BR:
mein01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
methR_P1572
DNA replication proteins [BR:
mein03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
methR_P1572
DNA repair and recombination proteins [BR:
mein03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
methR_P1572
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
BCG63835
UniProt:
A0A7R7AF46
LinkDB
All DBs
Position
1757695..1761192
Genome browser
AA seq
1165 aa
AA seq
DB search
MQPKFIHLRLHSEYSLVDGVVKVKPLINQLSALDMPAVAITDQSNLFALVKFYRAALGKG
IKPIAGADVLIFNPTDATQPYRLTLLAKNNIGYVTLTELISKAYQEGQHLGIPMIRREWL
EQNNEGLIALSGGMEGDIGLALLAQDTSPAKQMAQYWSELFPQSFYLELCRVGKRQEETY
IANAVQLAAELGLPVVATNNVRFLTTENFEAHEVRVCINQGRVIDDSRRPKDYTPQQYLR
STEEMLALFADIPEALANTVEIAKRCNVSLTLGENFLPDFPVPEGMSLDEFFINESKKGL
NRRLEKYPAVGNGTLAENRVAYDERLKMELDIIVQMGFPGYFMIVADFIQWAKDNAIPVG
PGRGSGAGSLVAYVLDITDLDPIEFDLLFERFLNPERVSMPDFDVDFCMDRRDEVIDYVA
RNYGREKVSQIITYGSMAAKAVIRDVGRVMSHPYSFVDRLSKLVPFEIGMTLTKALKEVP
EFQDLYDNDIEVKTLMDMALSLEGTVRNAGKHAGGVVIAPTRLTDFSPLYCEQGGGNLVT
QFDKDDVEAVGLVKFDFLGLRTLTIIDWALQTINKKQTELGESLVDITQIPRDDAASYEL
LTNAQTTAVFQLESRGMKELIKKLKPDCFDDIIALVALFRPGPLESGMVDDYINVKHGAK
AEYAHPVLVPVLEPTNGVILYQEQVMQIAREMGGYTLGGADLLRRAMGKKKVEEMAQQRA
IFTKGAVEGGIEEDIATYVFDLMEKFAGYGFNKSHSAAYALVAYQTAWLKRHYPAAFMAA
VLSSDLDNTDKIVILIDECQNMKLPVIPPNINISNYQFTVNDKYEIVYGIGAIKGVGEAA
IEDLLKEREKNGEFKGLYDLCKRVDLRKVNRRVFEALIRAGAFDVFNENRASHLAELPTA
LKVAERHVKMAAVGQNDLFGLAVNAESREDEIKDYSHKVPVWSEKERLALEKLALGLFLT
GHPIDQYRAELNNFVSGSLANNLATIEKSRGKIEVRLAGILVGVRTRLDRKGQTMAFLTL
DDKGSRMDVTIYAERFEVFKDILSADEVLIVEATAQLNGYSGMLSIIADKVFTMEQARED
YARCLMLEWDSNDLAEKAQDFMSNLQEVILPFAGGRCMLVVNYQSATEKASVQLGDSWRV
HPTDELMDRLQRIFKQTDAVHVKYR
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atgcagcccaaatttatccatttacgcctccattctgaatactctctcgtagatggagtg
gtgaaggtaaagccattgataaatcaattatctgcattggatatgcctgcggttgcgatc
accgatcaatctaatctatttgctttagtaaaattctaccgtgctgcgttaggtaaaggc
attaaacctattgctggtgcagatgttttaatctttaacccaactgatgcaacacaaccc
tatagacttaccttattagccaaaaataatatcggttacgtcactttgactgaacttatt
tctaaagcttatcaagaagggcaacacctaggtattcctatgatacgtcgggaatggttg
gagcaaaataacgagggtttgattgctttatcaggaggtatggaaggcgatattggtctc
gctttattggcgcaagatacaagtcctgccaaacaaatggctcaatattggagtgagttg
ttcccgcaaagtttttatttggaattatgccgagttggtaagcgccaggaagaaacgtat
attgccaatgcggtgcaattagcggcagagttaggtttacctgtggtagcaaccaataat
gtacgttttttaacaacagaaaactttgaggcgcatgaagtacgagtgtgtattaatcag
ggcagggtgattgatgattcacgccgaccgaaagattataccccacaacaatatttacgt
agtaccgaagaaatgttggctctgtttgccgatattcctgaagctttggctaataccgtt
gaaattgccaaacgttgtaatgttagcctaacccttggtgagaattttttacctgatttt
cctgtgcccgaaggcatgtctttggatgagttttttatcaatgaatctaaaaaaggctta
aatagacgcttagaaaaatatcccgctgttggtaatggtacgctggcagagaatagggta
gcttacgatgaacgtctaaaaatggaactggatattatcgtacaaatgggtttccctggc
tattttatgattgtggccgattttattcaatgggccaaagataatgcaattccagttggg
ccagggcgtgggtcgggtgcggggtcattggtggcttatgtcttggatattaccgactta
gatccaattgaatttgatttgttattcgagcgttttttaaatcccgaacgggtttccatg
cctgattttgatgtcgatttttgtatggatcgacgtgatgaagtgattgattatgtcgcg
cgaaattatgggcgtgagaaggtttcccagattatcacttatggctcgatggctgctaaa
gcggtaattcgtgatgtcggtcgggtaatgagtcatccctatagttttgtcgatcgactc
tccaaattagtgccgtttgaaattggtatgaccttgaccaaggcattaaaggaagtgcct
gagtttcaagatttgtatgataatgatatcgaggtaaaaaccttgatggatatggccttg
tctttagaaggcacggtcagaaatgcggggaaacatgcgggtggggtggtaattgccccg
acgcgattgaccgatttttcgcctttgtattgtgagcaaggtggcggcaatttagttacc
cagtttgataaagatgatgttgaagcagtgggcttggttaagtttgactttttaggcttg
cgcaccctgactattattgattgggcactacaaaccattaataaaaagcagacagagttg
ggtgagtcgctggtagatattactcaaatcccacgcgatgatgccgcttcttatgagtta
ttaaccaacgcacaaactacagcagtcttccagctggaatcccgtggcatgaaagagctg
attaagaagctcaagcccgattgttttgatgacattattgctttggtagctttgtttcgt
cctgggccattagagtcaggtatggtggatgactatattaatgtcaaacatggtgccaaa
gcggagtatgcacaccctgtattagtgccggtgttagagccaaccaatggggttatttta
taccaagagcaagtgatgcaaattgctcgtgaaatgggcggttataccttaggtggcgca
gatttattacgccgggccatgggtaaaaagaaagtggaagaaatggcgcaacaacgggct
atttttaccaaaggagcagtggaaggcggtattgaagaagacattgccacctatgtattt
gacttgatggaaaagtttgcgggttatggttttaataaatcgcactctgctgcttatgca
ttggttgcttatcaaacggcttggttaaaaaggcattatcctgccgcatttatggcagcg
gtgttatcatctgacttggataataccgataaaatcgtcattttaattgatgaatgtcaa
aatatgaaattgccagtgattccacctaatattaatatttctaattatcaatttaccgtc
aatgataaatatgaaattgtttatggtatcggagctattaagggagtcggtgaagcggct
atagaagacttgctgaaagagcgcgagaaaaatggtgagtttaaaggcttatatgatttg
tgtaagcgagttgacttgcgtaaggtgaatcggcgggtatttgaggctttgattcgtgca
ggggcttttgatgtttttaatgaaaatcgagccagccatcttgctgaattacccacggct
ttaaaagtcgctgaacggcatgtaaaaatggcagcagtcgggcaaaatgatttatttggt
ttggcggttaatgcagagagccgtgaagatgaaattaaggattattcgcataaagtccct
gtttggtcggaaaaagaacgcttggctttggaaaaactggccttgggtttgtttttaacg
gggcacccgattgatcaatatcgagcagaattaaataattttgtcagtggtagtttggca
aataatttggcgactattgaaaaaagtcgtggcaaaattgaagtgcgtttggcaggtatt
cttgttggagtaagaacacgtttggatcgtaaaggccagactatggcttttttgactttg
gatgataaaggctcgcgcatggatgtgaccatttatgcggagagatttgaagtctttaag
gatattttgagtgctgatgaagtgctgattgttgaagccactgcgcaactcaatggttat
tcagggatgctgagtattattgcggacaaagtctttaccatggagcaagcgcgtgaagat
tatgcgcgttgtttaatgctggaatgggatagcaatgatctagctgagaaagcgcaggac
tttatgtcgaatttacaggaagtcattctgccttttgcgggtgggcgttgtatgctggtg
gttaactatcaatctgcaaccgagaaggccagtgtacagttgggagattcttggcgtgtg
catccaaccgatgaattgatggatcgcttgcaacgcatatttaaacaaaccgatgcagtc
catgttaagtaccggtaa
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