Methyloprofundus sp. INp10_methR40d: methR_P2400
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Entry
methR_P2400 CDS
T07025
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
mein
Methyloprofundus sp. INp10_methR40d
Pathway
mein03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mein00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
methR_P2400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mein03019
]
methR_P2400
Enzymes [BR:
mein01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
methR_P2400
Messenger RNA biogenesis [BR:
mein03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
methR_P2400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
UvrD-helicase
P-loop_SecA
Cas3-like_C_2
AAA_22
SNF2-rel_dom
Utp25_C
CMS1
AAA_25
Motif
Other DBs
NCBI-ProteinID:
BCG64613
UniProt:
A0A7R7AGJ6
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All DBs
Position
2691590..2692885
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AA seq
431 aa
AA seq
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MSFAALGLSDPILKAVADKGYSTPSPIQAQAIPAVLQGSDIMAAAQTGTGKTAGFTLPLL
EMLAQGERVQANQARALIITPTRELAAQIEQSITDYGKYLPLTSTVVFGGVKINPQMMRL
RRGVDILVATPGRLLDLYNQRAIKFSQLEVLVLDEADRMLDMGFIHDIRKILAILPKHRQ
NLLFSATFSDEIRRLAKGIVHNPIEISVSPRNTTAETVKQWICPVDKKKKSALLTQLIKE
HQWEQVLVFTRTKRGANQLTRHLEEEGIHAAAIHGNKSQGARTKALAQFKQGSIRILVAT
DIAARGLDIDQLPQVVNFDLPNVPEDYVHRIGRTGRAGATGQAVSLVSADEFQQLSDIER
LIKKLLTREIIEGFDPLHVLPESRLNTKAYNPKKPKKPKVGHRDGQRSGTNKQGNQPRSR
NNQSQPRRAAK
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgagttttgccgccttaggcctatccgaccccattctaaaagctgttgctgataaaggt
tatagcactccttcccccatacaagcacaagcaattccagcagtactgcaaggcagtgac
ataatggctgctgcgcaaacaggtactggtaaaactgcaggatttaccctgcctttatta
gaaatgctggctcaaggtgaacgagtacaagccaatcaagcacgtgcattgatcattacc
ccaacacgtgagttggctgctcaaatcgaacaaagcattaccgactatggcaaatatcta
cctttaacttcaaccgtggtttttggtggtgtgaaaatcaatccacaaatgatgcgttta
cgtagaggtgtggatattttagttgctacgccagggcgcttattagatttatataatcaa
cgtgccatcaaatttagccagttagaagtactggttttagatgaagccgatcgtatgttg
gatatggggtttatccatgatattcgcaaaatattagcgatattacccaagcatcgccaa
aatttattattctcagcgactttctcggatgaaatacgtcgtttagccaaaggcatcgtg
cacaacccgattgaaatttcagtcagcccacgtaataccactgcagaaacggttaaacag
tggatttgtcctgttgacaagaaaaagaaatcagcactacttacacaactgatcaaagag
caccaatgggaacaagtacttgtctttacccgcaccaaacggggtgctaaccagttaacc
cgtcaccttgaagaagaaggcattcatgctgccgcaattcatggcaacaaaagccaaggt
gcacgcactaaagcattagctcaatttaaacaaggttctataagaatattggttgccacc
gatattgctgcgcgtggtttggatatagaccaattaccacaagtggttaattttgattta
cccaatgttcccgaagattatgtgcatcgtataggccgcacaggacgcgcaggtgcaacg
gggcaagccgtctccttagtcagtgctgatgaatttcaacagttatctgatattgaacgt
ttgattaaaaaattactcacccgtgaaataatagaaggctttgaccctttgcatgtatta
ccagaatcccgtttaaacaccaaagcatacaatcctaagaaacccaaaaaacctaaagtg
ggtcatcgtgatgggcaacgctcaggcactaacaaacaaggtaatcaaccacgtagtaga
aataaccaatctcaaccacgtagggcagctaaatag
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