Methyloprofundus sp. INp10_methR40d: methR_P3277
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Entry
methR_P3277 CDS
T07025
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
mein
Methyloprofundus sp. INp10_methR40d
Pathway
mein03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mein00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
methR_P3277
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mein03019
]
methR_P3277
03110 Chaperones and folding catalysts [BR:
mein03110
]
methR_P3277
03029 Mitochondrial biogenesis [BR:
mein03029
]
methR_P3277
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mein04147
]
methR_P3277
Enzymes [BR:
mein01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
methR_P3277
Messenger RNA biogenesis [BR:
mein03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
methR_P3277
Chaperones and folding catalysts [BR:
mein03110
]
Heat shock proteins
HSP60 / Chaperonin
methR_P3277
Mitochondrial biogenesis [BR:
mein03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
methR_P3277
Exosome [BR:
mein04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
methR_P3277
Exosomal proteins of other body fluids (saliva and urine)
methR_P3277
Exosomal proteins of breast cancer cells
methR_P3277
Exosomal proteins of colorectal cancer cells
methR_P3277
Exosomal proteins of bladder cancer cells
methR_P3277
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
BCG65438
UniProt:
A0A7R7AH99
LinkDB
All DBs
Position
complement(3638642..3640294)
Genome browser
AA seq
550 aa
AA seq
DB search
MAAKEVKFGDDARSLMANGVNILANAVKATLGPKGRNAVLDKSFGAPTITKDGVSVAKEI
ELADKFENMGAQMVKEVASQTSDVAGDGTTTATVLAQAIVNEGLKSVAAGMNPMDLKRGI
DLAVTKSVAAIIASATPCTDNKAIAQVGTISANADESVGEIIADAMAKVGKEGVITVEEG
TGLDNELDVVEGMQFDRGYLSPYFINNQDSMSVELDDPFILLFDKKISNIRDLLPTLEGV
AKAGRPLLIIAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLEDIAVLTGATV
ISEEIGLSLEKVEMEQLGTAKKIQISKENTVIVDGAGSEDNIKGRVAQIRAQADEASSDY
DKEKLQERLAKLAGGVAVIKVGAATEVEMKEKKARVEDALHSTRAAVEEGVVAGGGVALV
RALSALDGVEGINHDQKVGVDILRRAMSAPLRQIVTNAGDEASVVLNEVAKGEGNFGYNA
ATGEYGDMIEMGILDPAKVTRAALQNAASVAGLMITTEVMVADAPAEEGAAPAMPDMGGM
GGMGGMGGMM
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaaaagaagtaaaattcggcgatgacgcacgctcattaatggcaaacggtgta
aatattctggcaaatgcagtaaaagcaactttgggacctaaaggtcgtaatgctgtttta
gataaaagctttggcgcaccaaccattactaaagatggtgtttcagttgcgaaagaaatc
gaattagcagataaattcgaaaacatgggtgcacaaatggtgaaggaagttgcttcacaa
acatctgatgtagcaggtgatggaactacaactgcaacagtattagcacaagcgattgtt
aatgaaggcttgaaatcagttgctgcgggcatgaacccaatggacttaaagcgcggtatt
gatttggcggtaactaagtcagtagcagcgattattgcttcagcaacaccttgtacagat
aacaaggcaattgcacaagtaggaactatttctgcaaacgctgatgagtcagtgggtgaa
atcattgctgatgcaatggcaaaagttggtaaagaaggtgttatcactgttgaagaaggt
actggtttagacaacgaattagatgttgttgaaggaatgcagtttgaccgtggttacttg
tctccttacttcattaacaatcaggatagcatgagcgttgaattagatgatccattcatc
ttattgttcgacaaaaaaatctctaacatccgtgatttgctccctacattagaaggcgtt
gcgaaagcaggtcgtcctttattgatcattgctgaagatgtagaaggtgaagcattagcg
actttggttgttaataacatgcgtggtattgttaaagtagcggctgttaaagcacctggc
tttggtgatcgtcgtaaagcaatgttggaagatattgcggtattaacaggcgcaacggtt
atttctgaagaaatcggtttatctttagaaaaagttgaaatggaacaacttggtacagct
aagaaaattcaaatcagcaaagaaaatacagtgattgttgacggtgcgggttctgaggac
aatatcaaaggccgcgttgcacaaattcgtgctcaagctgatgaagcaagctctgactac
gataaagaaaaactacaagaacgtcttgctaaattagcgggtggtgttgcggttatcaaa
gtaggcgcggcaactgaagttgaaatgaaagagaaaaaagcacgcgtagaagatgcattg
cattcaacacgtgcagcagttgaagaaggtgttgttgcgggtggtggtgttgctctggtt
cgtgcgcttagtgcactagacggtgttgaaggcatcaaccatgatcagaaagtaggtgtt
gatattttacgccgtgcgatgtctgcgcctttgcgtcaaatcgtaactaatgctggtgat
gaagcgtctgtcgtgctaaatgaagtggctaaaggagaaggtaacttcggctataacgcg
gctactggcgagtatggcgatatgattgaaatgggaatcttggatcctgcgaaagtaaca
cgtgcagcattacaaaatgcagcctctgttgcgggtcttatgattactacggaagtgatg
gttgctgatgcaccagctgaagaaggtgctgcacctgccatgcctgatatgggcggcatg
ggtggtatgggcggtatgggcggcatgatgtaa
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