Methyloprofundus sp. INp10_methR40d: methR_P3461
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Entry
methR_P3461 CDS
T07025
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
mein
Methyloprofundus sp. INp10_methR40d
Pathway
mein03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mein00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
methR_P3461
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mein03021
]
methR_P3461
03400 DNA repair and recombination proteins [BR:
mein03400
]
methR_P3461
Enzymes [BR:
mein01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
methR_P3461
Transcription machinery [BR:
mein03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
methR_P3461
DNA repair and recombination proteins [BR:
mein03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
methR_P3461
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
PBP2
Lipocalin_7
Motif
Other DBs
NCBI-ProteinID:
BCG65616
UniProt:
A0A7R7AI19
LinkDB
All DBs
Position
complement(3835579..3836586)
Genome browser
AA seq
335 aa
AA seq
DB search
MHSAVTGLLKPQLVEVVNKSAYHSRIVIEPLERGFGHSLGNALRRVLLSSIPGCAVVSAE
IEKAEHEYSVIEGVHEDVIDILLNIKQLAVVLHSGNEITLSLNKSGAGTVTAADIDLPHD
VEIINPELVIANLTDEGVLSMKINIQRGRGYEPSTVRTEGFGVGVMGALQVDASYTPVLK
VAYSVETTRVDQRTNLDRLIIELETNGTVDPEATIKLAATILHDQLSVFVDFEKVNEQVA
EEVIEPVEQIDPTLLRPVDDLELTVRSANCLKAENIYYIGDLIQRTEFELLKTPNLGRKS
LTEIKDVLALKGLSLGMRLENWPPENLVEQSQAIL
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgcatagtgctgttactggtttattaaagcctcagctcgtagaagttgtaaacaaatca
gcttaccattcaagaattgttattgagcctcttgaaagaggtttcggtcattcgcttgga
aatgctttaagaagagttcttctttcttccatacctggttgtgcagtggtaagtgctgaa
attgaaaaagcagagcatgagtactcggtaattgaaggtgttcatgaggatgtcattgat
atcttattgaatattaagcaattggctgtagtgttacattctggaaatgaaattacactt
tcgctgaataagtctggcgctggtactgttacagctgctgatattgatttgccacatgat
gttgagattatcaatcctgaattggtcatagctaatttgactgatgagggtgtgctctcc
atgaaaattaacattcagcgtggtcgtggttatgaaccttcaactgtacgcactgaaggt
tttggggttggtgttatgggggctttgcaggttgatgcgtcatacactcctgtacttaag
gttgcttatagcgttgaaactacgcgtgtagaccagcgtactaatcttgatagattgatt
attgagttggagacgaatggtactgtggatcctgaagctacaattaagcttgctgctacg
attcttcatgaccaactatctgtatttgttgattttgagaaggttaacgagcaagtggct
gaagaggttattgaacctgtagagcagatagatccaacgctgcttcgtcctgtagacgat
ttagaacttactgttagatcagctaattgccttaaagctgagaatatatattacatcggt
gaccttatacagcgtaccgagtttgaattattaaaaacacctaacttaggcagaaaatcg
cttactgagattaaagatgtattggctttgaaaggcttgtctttaggcatgcgccttgaa
aattggcctcctgaaaatctcgtagagcaatctcaagcgattctataa
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