Methyloprofundus sp. INp10_methR40d: methR_P3492
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Entry
methR_P3492 CDS
T07025
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
mein
Methyloprofundus sp. INp10_methR40d
Pathway
mein03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mein00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
methR_P3492
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mein03021
]
methR_P3492
03400 DNA repair and recombination proteins [BR:
mein03400
]
methR_P3492
Enzymes [BR:
mein01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
methR_P3492
Transcription machinery [BR:
mein03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
methR_P3492
DNA repair and recombination proteins [BR:
mein03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
methR_P3492
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
Apocytochr_F_C
Peptidase_M23
eRF1_3
Motif
Other DBs
NCBI-ProteinID:
BCG65647
UniProt:
A0A7R6WB54
LinkDB
All DBs
Position
complement(3852932..3857146)
Genome browser
AA seq
1404 aa
AA seq
DB search
MKDLLNFLKRQNRSADFDEISIGLASPNQIRSWSYGEVKKPETINYRTFKPERDGLFCAK
IFGPVSDYECLCGKYKRLKHRGVICEKCGVEVTLSKVRRDRMGHIELASPVAHIWFLKSL
PSRIALLLDMTLREIERVLYFESFVVLEEGMTPLERKKLLTDEEYLDAFEEYGDEFVAMM
GAEAIFELLKTIDIQGEVTQLREEINSTNSETKIKKFSKRLKVLESLLGSKNRPEWMVMN
VLPVLPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLHRLLDLNAPDIIIRNEKRMLQ
ESVDALLDNGRRGRAITGTNRRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVIVVGPT
LKLHQCGLPKKMALELFKPFIFSKLQLRGLATTIKAAKKMVENEGAEVWDILEEVIREHP
ILLNRAPTLHRLGIQAFEPTLIEGKAINLHPLVCSAFNADFDGDQMAVHVPLSIEAQLEA
RTLMMATNNILSPANGEPIINPSQDVVLGLYFISREKLKAKGDGAAFYGVEDVQKALDAK
AVELQSKVQVRITERLKNEDGEIDEKTTRYQTTVGRVLIWDVVPEGMPFEIVNCDMTKKN
ISRLLNYSYRYLGNKDTVVLADQIMYLGFKYATRSGISFGINDMEIPREKQDILAEAERE
VFEIQEQYDSGLVTDGERYNKVVDIWSHANEKVAKVMMDALGTDEVVDEDGSVLKQKSFN
SIFMMAESGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLDVLQYFISTHGAR
KGLADTALKTANSGYLTRRLVDVAQDLVINGVDCGTTKGMLMAPIIEGGDVVETLSERVL
GRVVIGDVITVDATEVIVPDGEMLDEHYVALLEKNSIDNVYVRSIITCENRHGVCAKCYG
RDLGRGHLVNSGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRQVAISNVQVKSKGVIKL
HNLKTVENRAGNLVAVSRSGEVGVMDEYGREKEKYKIPYGAELTCKDGSAVEAGDVVVSW
DPHVHPVVTEVAGIVQLVDFEAGISVQELSDEITGVSSITVIDPKMRVSAGKDLRPLVKL
FTPEGDEVNLPNTEMAAQYVLPAGSIVAVKDAGEIQVGDVLARIPQESSKTRDITGGLPR
VADLFEARKTKDPAILAEATGAVSFGKETKGKQRIVITDSDGVQYETLVPKWRHITVFEG
EFVDKGETIAEGELTPHDILRLRGITELTAYLVKEIQDVYRLQGVKINDKHIEAIIRQML
RKVEITASGDSNFTKGEQVERVVVREVNNKLEVEEKIPASFESVLLGITKASLATESFVS
AASFQETTRVLTDAAVRGLKDQLYGLKENVIVGRLIPAGTGLAFHEERRKRQAHELDSVR
VTEQGKSTEIIDAEAALKQALNAE
NT seq
4215 nt
NT seq
+upstream
nt +downstream
nt
ttgaaagatttattaaatttcttaaaacgccaaaatcgttctgctgattttgatgagatt
agcatcggattggcatcgccaaaccaaattaggtcatggtcatacggtgaagttaaaaag
ccggaaacaataaactaccgtacttttaagcctgagcgtgatggccttttttgtgccaag
atttttggcccagtaagtgactatgaatgtttgtgtggaaagtacaagcgtttgaagcat
cgcggtgtaatttgtgaaaaatgtggtgttgaggttactttatcaaaagtgcgtcgcgat
cgtatggggcatattgagctagcaagtccggttgcgcatatttggtttttgaagtcgcta
ccttcgcgtattgcattgttattggatatgactttgcgtgagattgagcgagtcttgtat
tttgaatcatttgtagtgcttgaagaaggcatgacgcccttagaaagaaaaaaactacta
acagatgaagagtatttagatgcttttgaagagtatggtgatgaatttgtcgccatgatg
ggagctgaagccatttttgagttgctaaaaaccattgatattcaaggtgaggtaactcag
ttaagagaagagattaatagcactaactctgaaactaaaattaaaaagttctctaagcgc
ctgaaggtgttggagtcattgttgggctcaaaaaatcgtccggaatggatggtaatgaat
gtattgcctgtattgccgccggaattaagaccattagtgccattggatggtggacgattt
gctacttctgatttaaatgatttgtatcgtcgagtcattaaccgaaacaatcgtttgcac
cgattattggatttgaatgcacctgatatcattattcgtaatgaaaagaggatgttgcag
gagtccgttgatgcgttgcttgataacgggcgtagaggtcgtgccattacaggaacaaac
cggcgtcctttaaaatctcttgctgatatgattaaaggaaagcaaggtagatttagacaa
aatttattaggtaagcgagtcgattactcaggtcggtcggtaattgtggtagggccaaca
ttgaaattgcatcagtgtggcctgcctaagaaaatggcgctagaattatttaaaccgttt
atttttagtaagttgcaattaagaggtttggcgacaaccatcaaggcagctaaaaagatg
gtggaaaatgaaggtgctgaagtttgggatatacttgaagaggttattcgcgagcatccc
attttgcttaatagagcaccaacattgcatagattagggattcaggcgttcgagcctact
ttaattgaaggcaaggcaattaatttgcatccattggtatgtagtgcttttaatgctgac
tttgatggagatcaaatggcggtgcatgtgcctttatcaattgaggcgcagttagaagca
agaacattgatgatggcgactaataatattttgtctcctgccaatggtgagccgattatt
aacccgtcgcaagatgttgtattgggtctgtacttcattagcagagaaaagctgaaagct
aaaggtgatggagctgcattctatggggttgaagatgtgcaaaaggccttggatgcaaag
gcagtcgagctacaatcaaaggtacaagtaagaataactgaaaggttaaaaaatgaagat
ggtgagattgatgagaaaacaactcgttatcaaacaacagtaggtcgagttttaatctgg
gatgttgttcctgaaggcatgccatttgaaatagtcaactgtgacatgaccaagaaaaat
atctctcgcttacttaattatagttaccgttatttaggtaataaggatacagtggtgttg
gctgaccagattatgtatcttggctttaaatatgcaacacgttcaggtatatcatttggt
ataaatgatatggaaatccctagagagaagcaggatattctggcggaggctgagcgtgag
gtttttgagattcaagagcagtatgattcgggtttagtaactgatggtgagcgatataac
aaagtagtagatatttggtcgcatgctaatgagaaagtggccaaagtgatgatggatgcg
ctagggacagatgaggttgttgatgaagacggcagcgtgctaaagcaaaaatcattcaat
tcaatttttatgatggctgaatctggagcgcggggttctgcggcacaaattagacagtta
gcaggtatgcgtggtttgatggcaaaacctgatggttcgattattgaaacacctattact
gcaaacttcagagaaggtttggatgtattgcagtactttatttcaacgcatggtgcacgt
aaaggtttggctgatacggctctgaaaacagctaactctggatatttgacgcgtcgtttg
gttgatgtggctcaagatcttgttattaacggtgttgattgtggtaccactaaaggtatg
ttgatggctcccattattgaggggggggatgtggttgagaccctttctgagcgagtgctg
ggtcgagtagttattggtgatgtaataactgttgatgctactgaagttattgttcctgat
ggagagatgctggatgagcattatgtcgctctgctagaaaaaaatagtatcgataatgta
tatgtgcgttctattattacctgtgaaaaccgacatggagtatgtgccaagtgttatggt
cgtgatttaggtcgtggtcatttggtcaatagtggtgaggcagttggtgtaatcgctgca
caatcaattggcgagcctggaacgcagctaacaatgcgtacttttcatattggtggggct
gcatcgcgtcaagttgcaatcagtaatgtgcaggtaaaatctaaaggggttattaaatta
cataacttaaaaactgtagaaaatcgggctggcaatttagttgctgtgtctagatcaggt
gaagtgggggtaatggatgagtatggtcgtgaaaaagaaaagtataagataccctatgga
gcagagttaacctgcaaagatggtagtgcggtcgaggcgggtgatgttgttgtttcatgg
gatccgcatgtgcatcccgtagtgactgaagttgcaggtattgtgcaattggttgacttt
gaagctggtatttcggtacaagagttgtctgacgaaataacgggggtaagttcaattacc
gttatcgatcctaagatgcgcgtaagcgcaggtaaagatttgcgcccgttagttaaattg
tttacgcctgaaggggatgaggtaaatctacctaatacagaaatggcggcgcaatatgtg
ttgccggcaggatcaattgttgctgtgaaagatgcgggcgaaattcaggttggggacgta
ttggctagaattccgcaagaatcaagtaagactcgtgatattacaggggggctaccaagg
gtagctgacttatttgaagctagaaaaactaaggatcctgcgattcttgcagaggcaacg
ggtgcggtgtcttttggtaaggaaacaaaaggtaagcaacgtattgttattactgattct
gatggtgtgcagtatgagacattggtgccaaagtggcgacatattactgtatttgaaggt
gaatttgttgacaagggtgagacgattgctgaaggtgagttaacgccacatgatatttta
aggttgcgtggtatcacagagttaacggcatacttggtcaaagagattcaggatgtttat
cgtttgcagggtgtgaagatcaatgataagcatattgaggcgattattcgtcaaatgttg
cgtaaagttgaaattacagcttcgggtgatagtaattttactaaaggtgaacaagttgag
cgagttgttgttagagaggtaaataacaaacttgaagtggaagaaaaaattccagcaagc
tttgaatcagtgcttctgggtattactaaagcatctttggcgacagagtcatttgtttct
gctgcgtcatttcaagaaacaacaagagtattaacggatgcggcggtgcgtggattgaag
gatcaattatacggactaaaagaaaatgttattgttgggcgtttgattcctgctggaact
gggctggcttttcatgaagagcggcgcaagcgtcaagcacatgaattggattcagtaaga
gtaactgagcaaggtaaatccacagagattatcgatgcagaagcggcgcttaaacaagca
ttgaatgctgaataa
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