Methyloprofundus sp. INp10_methR40d: methR_P3632
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Entry
methR_P3632 CDS
T07025
Name
(GenBank) exodeoxyribonuclease V gamma subunit
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
mein
Methyloprofundus sp. INp10_methR40d
Pathway
mein03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mein00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
methR_P3632
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mein03400
]
methR_P3632
Enzymes [BR:
mein01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
methR_P3632
DNA repair and recombination proteins [BR:
mein03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
methR_P3632
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
BCG65776
UniProt:
A0A7R6WCC4
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All DBs
Position
4016824..4019985
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AA seq
1053 aa
AA seq
DB search
MFILHSSNKTEHLLEHLSTIIQTAPLSSPFSKEVFLIQSQGMERWLSQQLAQRLQVFANF
EFLFPGKFFSQMARDVQQSLHSDSFDRELMVWRFELLLRDLDAPVFTSLRQYLSGENIDL
KRFQLATHLAQIFDQYQLMRPTMLNNWQVGKLHFNSTSEKWQQALWKKLTAQIGTQHRGA
LWLQAIALFNQLDEQALSAQLPERISIFGLNTMPPLFMEFLQGLARHTDVHLYLLNPAQA
FWADIVARKQADLEEFDNGHPLLASLGQQGREYQQMLLDRAFAIELDSFAENEAQNESES
LTNLQQLQNDILNNLTEAFPLEKDHSISIHSCHSRLREIEVLKNQILHALETDPEIKLRD
IVIMAPDIQQYAPFINAVFDDIQHAIADRSLRSTNSSLDAFLRLLRITQGRFGWQEVMDL
LKQEEVYRCFGLNATDVELIGHWVAATNIRWGKSAQHKKQLQLPESPENTWLAGLERMLM
GYAVGSDDEFIAGTLPYIDIEGTSAQALGGLHDFLQLLFSASRELAKANTLENWANRLIY
FLDLLFPAEALDANQQAEKRQVTEILQELNTELAELHQQPVALAVILSWLEGRVEESKSA
NGFLRGQLTFCSMLPMRSIPFKVIALLGMNEGEFPHIDQHLTFDLLANDFKPGDRSRRSD
DRYQFLEILLSARQQLIITYIGQSISENETIPASVILHELLDIMQSHYQLTDLVTKQPLQ
GFSPRYFKQDASLISYSQVDYATACALRQQQPEATPWWQGNLASEPHNSIDINTLFAFFR
HPQKYFLQKSLSIRLSQIESDAPEREVFSLDGMESYLINQQWVEAKLNDSNLSLAKLKAQ
GRWIVGELGEVVFNSLEQEIEQFVSKIAAKEVGDPIAPLAIDIAIGELRLTGTLANLHSE
GSLFYRYSPMKGKDFIIAWLHHLIINRIQPQSTHLVTQDDFISFLPIHIQGDELERFIQY
FIAGQSQPDVFFTEAAFVYIKQQHSLNQPKSRSKVPALLKAQTAFSEALEKSYEPELGLL
YQNLESVEELLGVEFEKYCCELLLPVWEAVHGG
NT seq
3162 nt
NT seq
+upstream
nt +downstream
nt
atgttcatcctgcacagctccaataaaaccgaacatttactcgaacatctcagcactatt
attcaaactgcgccactgtcctcaccgttcagcaaagaagtgttcttaatccaaagccaa
ggcatggagcgctggctctcacagcaactggcacaacgcctgcaagtctttgctaatttt
gaatttttatttccgggtaagttcttcagccaaatggcgcgtgatgtacaacaatcattg
cactcagatagttttgatcgtgaattaatggtgtggcgctttgaactcttattacgcgat
ttagatgcccctgtctttacatcactacgccaataccttagcggcgagaatatagattta
aaacgcttccaattagcgacacatttagcgcagatttttgaccaataccaactgatgcgc
ccaaccatgctaaataattggcaagtcggcaaattacacttcaacagcacttccgaaaaa
tggcagcaagcattatggaaaaagttgactgcgcaaataggcactcagcatcgtggtgct
ttatggctacaagcgattgcactatttaaccaattggatgaacaggctttaagtgcgcaa
ttacctgagcgtatttccatttttggcctgaataccatgccgcctttatttatggaattc
ctgcaagggctggctcggcataccgatgtacatctatacttactcaatccggcacaagct
ttttgggctgatattgttgcgcgtaaacaagcagatttagaagagtttgataatggtcac
cccttattagccagcttaggccaacaaggtcgtgaatatcaacagatgttgcttgatcgt
gcctttgcaattgaattagacagttttgctgaaaatgaagctcaaaatgaatcagaatcg
ttaacgaatctgcaacaattgcaaaatgacattctcaataatttaaccgaagcgttccct
ctggaaaaagaccactccattagtattcactcctgccattcgcgactacgcgaaattgaa
gtattaaaaaatcagatattacatgccttagaaactgatcccgaaattaagttacgcgat
atcgtgattatggcacctgatattcaacaatacgcgccctttatcaatgcagtatttgac
gatattcaacatgccattgccgatcgcagtttgcgcagtaccaatagctcgttagatgcc
tttctacgcttgctacgcataacccaaggccgctttggttggcaagaagtcatggattta
ttaaagcaagaagaggtctatcgctgctttggtttaaatgcaactgatgttgaactaatc
ggccattgggttgcagcaacaaatatccgctggggtaaatcagcacaacataaaaagcaa
ttacaattacctgaatcacctgaaaatacgtggctggcaggtttggagcgtatgctaatg
ggctatgccgttggttcagacgatgagtttatcgcaggcacgctaccttatatagatatt
gaagggacttctgcgcaagcactaggtggtttgcatgattttctacaattgctctttagt
gccagtcgtgaattagccaaagccaataccctagaaaattgggcaaaccgtctcatctat
tttctagatttgctgtttcctgcggaagcattagatgccaatcaacaagccgaaaaacgg
caagtaaccgaaatactgcaagagctcaataccgaattagctgaactgcatcaacaaccc
gttgcattagcggttattctatcttggctggagggtcgggtagaggaaagcaaatctgcc
aacggttttttgcgcggccaattgaccttttgctcgatgctgccgatgcgctccattccc
tttaaagtgattgccttattaggtatgaatgaaggtgagttcccgcatattgaccagcat
ttaacctttgatttattagccaatgactttaaaccaggagaccgctcgcgccgctccgat
gatcgttaccaatttttagaaattttattatcagcacgtcaacaactgattatcacctat
attggtcaatccatcagtgaaaatgaaaccatccccgcctctgtgatcctgcatgaattg
ctggatattatgcagtcgcactatcaattaacagacctagtaaccaaacaaccactgcaa
ggctttagtccccgctattttaagcaagatgctagcttaataagctatagccaagtggac
tatgccaccgcctgtgcgctacgtcagcaacaacctgaagcaacgccttggtggcaagga
aacttagcaagtgagccacataacagcatagatattaatacgctctttgcttttttccgc
cacccacaaaaatatttcttacaaaaaagtttaagtattcgcctcagtcaaattgagagc
gatgcccctgaacgggaagtatttagtttagacggtatggaaagttacctgattaatcag
caatgggtcgaagcaaaattgaacgatagtaatttatcactggccaaactaaaagcgcaa
ggtcgttggatagtaggtgaactaggcgaagtggtctttaattctttggaacaagagatt
gaacaatttgtcagtaaaattgccgccaaagaagtgggtgatccgatagcgccattagcc
attgatattgctatcggtgagctgcgactcactggcactttagcgaatttacacagcgaa
ggcagtttgttttatcgctattcgccgatgaaaggcaaagatttcattattgcttggcta
catcatttaattatcaaccgtatccagccacaaagcactcatttagtcacccaagatgat
tttatcagctttttacctatacatattcaaggcgatgaattagagcgctttatccaatat
tttatcgcaggccaaagtcaacccgatgtattttttaccgaagccgcttttgtttatatc
aagcagcaacatagtttaaatcaacccaaaagtcgcagtaaagtacctgctttattaaaa
gcacaaacagcgtttagtgaggcattggaaaaaagctatgaacctgaattaggtttgctg
tatcagaacctagagtcagttgaagagttgttaggagtagagtttgagaaatattgttgt
gaattgttattgccagtttgggaagcagtgcatggtggttag
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