Methyloprofundus sp. INp10_methR40d: methR_P3657
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Entry
methR_P3657 CDS
T07025
Name
(GenBank) exodeoxyribonuclease V alpha subunit
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
mein
Methyloprofundus sp. INp10_methR40d
Pathway
mein03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mein00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
methR_P3657
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mein03400
]
methR_P3657
Enzymes [BR:
mein01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
methR_P3657
DNA repair and recombination proteins [BR:
mein03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
methR_P3657
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
AAA_11
Viral_helicase1
UvrD_C_2
SH3_13
UvrD-helicase
NAT10_TcmA_helicase
RecD_N
UvrD_C
AAA_5
AAA_22
SLFN-g3_helicase
nSTAND3
NTPase_1
AAA
YjhX_toxin
AAA_7
AAA_28
T2SSE
CbiA
Motif
Other DBs
NCBI-ProteinID:
BCG65801
LinkDB
All DBs
Position
complement(4045791..4047416)
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AA seq
541 aa
AA seq
DB search
MSDQLQLSRLDYAFAQFLVKRSALEKEQAKQFGILVAQLSYAQSQGHSCIEVATADEKLL
LASGLVDDTGTLPLVLENKYLYLQRYWSYECQLAKNITDLITNEHSGSADIKVIEQYFTS
SSAIDWQKEAAKAALVNSFSIITGGPGTGKTTTVVKILALLQELAAQPLNIALAAPTGKA
AMRLQESIGNSKQKLPCSNFIRELIPEKVLTIHNLLGARPPSPYFKYNAASPLPFDIVVI
DEVSMIDLPLMSKLLSALRLDARLILLGDKDQLASVETGTVLADLTLALSKYTQELKVSY
RFKGNIKEFSEAINQQKQQHAWDLLSAGHDDVGLLKDDLISYIADKQVEYLSLIRQRADF
IACYAAFNAFQVLCVIREGLYSVADINYRVAEQLQDRKLINSSAHWYSGRPIMITQNDAV
LQLYNGDIGICMPDQENNKQLMVFFLSPSGAVRKYLPARLPHCETVFAMTIHKSQGSEFD
EVLLVLPEKINPILTKELIYTGITRAKKSIKILATKEVFVETLQRKVERFSGLANRIRKI
T
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatcaattacagttaagccgtttagactatgcttttgctcagtttttagttaaa
cgtagtgctttagaaaaggagcaagcaaagcaatttggaatactggttgcacaattatcc
tatgcacaaagccaaggtcactcttgtattgaggtagcaactgcagatgaaaagttatta
ttagcatcgggtttagtagatgatacggggacattgccactagtacttgagaataaatat
ttgtacttacaacgctattggagttatgagtgtcaattagctaagaatattactgattta
ataacaaatgagcattctggaagcgctgatataaaggtgatagagcagtattttactagc
agctcagcaatagattggcaaaaagaagcagcaaaagcagctttggtaaattcttttagt
attattactggtggcccaggtactggaaaaactacaacagttgttaaaattctggcatta
ttacaagaactggctgcccagccactgaacattgctttagcagcgccaacaggtaaagcg
gcaatgcgcttacaagagtcgatcggcaatagtaagcaaaaattaccctgctccaatttt
attagggaactgattccggaaaaagttctgactattcataacctattaggggctagacct
ccctcgccttattttaaatataacgctgcatcccccttgccttttgatattgttgttata
gatgaagtatctatgattgatttaccattaatgagtaagttattgagtgcattaaggtta
gatgcacgattaattttacttggtgataaagaccaattagcttcagttgaaacgggcact
gtgttggctgatttaacgcttgcattgtctaaatatactcaggaattaaaagtatcatac
cggttcaaaggtaatatcaaagaattctcggaagccatcaatcaacaaaagcaacagcat
gcttgggatttattaagtgcaggacatgatgatgtggggctgttaaaggatgacttaata
agctatattgctgataaacaagttgaatatttatctttaattagacaaagagctgatttt
atagcatgttacgcagcgtttaatgcatttcaagtactatgtgtgattagagaaggtttg
tatagcgttgcggatataaattatcgtgtagcagaacaactacaagataggaaattgatt
aatagttcagctcattggtatagtggccgccccattatgattacccaaaatgatgctgtt
ttgcaattatataatggggatattggtatttgcatgccagatcaggagaataacaagcaa
ttaatggtgtttttcttgagtccatctggagctgtaaggaaatatttgccagctcgttta
ccacactgcgaaactgtttttgcaatgacgattcataaaagtcagggctcagagtttgat
gaggtgttattagtattaccagagaaaattaacccaatcttaacaaaagaacttatttat
acaggtattactcgcgctaaaaagagcattaaaatactagcaacaaaggaagtatttgta
gaaaccttgcaaagaaaggtagagcgctttagtggcttggcaaacagaataaggaaaata
acttga
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