Methyloprofundus sp. INp10_methR40d: methR_P3711
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Entry
methR_P3711 CDS
T07025
Name
(GenBank) DNA repair protein SbcC/Rad50
KO
K03546
DNA repair protein SbcC/Rad50
Organism
mein
Methyloprofundus sp. INp10_methR40d
Brite
KEGG Orthology (KO) [BR:
mein00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mein03400
]
methR_P3711
DNA repair and recombination proteins [BR:
mein03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
methR_P3711
Archaeal homologous recombinant proteins
methR_P3711
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
nSTAND3
AAA_21
ABC_tran
nSTAND_NTPase5
SMC_N
MeaB
AAA_22
Motif
Other DBs
NCBI-ProteinID:
BCG65843
LinkDB
All DBs
Position
complement(4106996..4110727)
Genome browser
AA seq
1243 aa
AA seq
DB search
MRILAIRGKNLASLANEFEVLLEAGTLQKVGLFAITGPTGAGKSTILDALCLALYDQMPR
LPEGHGVAIGHKDEDEAVRVKSHDVSSILRRGTASAFAEVDFIGQDKQSYRARWELSRAR
NKVGGRLQAQRMSLVNINSQEKFGQGKKDTQQEIVKRLGLNFAQFRRSVLLAQGDFAAFL
KAKKDERSSLLEKITGTDIYSELSIAAFERAKLEKLHLDNIQEKLADKVPLTTEARAELN
NEHLQLSEQLTALQQQQKIKQLILDWFTCLAKLTVDQQQAQQQCQQQQESWNDNSSDREL
LTQVELVQPLRPLLQQVLSLSTECAEAQLKLTDSETTLIKAEQTVNDVSQQVQIKQQQFV
RAESSFNAAQPILIIARELDTKIANSQARLQDLQQEVSSQQEKWQTADAKVTELSTQQEQ
QRQQLQQLQIWQEQHMDLQAVANEWGRWESNIQDYLAQQQALIEQQANHTQLENNIAAQQ
TELSSLQTASELCLAKEQQLSAELLALEQQSDSQALSDLHQQQAQLETQQAECKSTVSLA
EQGLALQLDLHNTQTALTTNEQTLQQANTQIEQLIVQQDNKQGQLQEAQHAFNLMHAASQ
KTAQDLRALLMTEQPCPVCGANEHPWADTHLEVLQQPVAEQQARVEQLTAAKEQLVSELS
TQQSLVKQAKQEQGQLTKTKQHTEQRLNELAKQWLLIGLENKPTWLNLQAADITQLQQQS
ARLHAQYIAIKNQVSLALDLQTQITAVRSQRDAANQQHIEQRLKTTELDKNIAEQLSTLA
ANSNSIQQLETKLLHIETILNTPLQQLDNWQTELSEAGADFLQQLRDSMVLWQNNSQQQE
LLNKDLNQIKHDLAIASTAAEQQHHLGLQLQQELQQHNTQQQDLLTDRQQYCQGLPANDY
ARNVEQQLQTAGNHKQQAEAELSTAHSETKTWQSTVQHWQTEQQRRLAKQDSTEQELQTE
LSNLQLTKATAQELLSKDADWITTQKQQSATLTQALQEAQANLKVSTTHLQEHEQHTPLE
QESLVITQLEKLQSEYEILSSEKDNKIFLLRSDDEKIAAGNHLQAQLSQQTHIYEQWESL
NELIGSKSGQKFRTFAQSLTLETLLSYTNRHLQEFAKRYVLQRVPGSELELQVIDRDMAD
EVRSIHSLSGGESFLVALALALGLASLSSNKTQVESLFIDEGFGSLDQETLDIALASLDT
LQSLGRKVGVISHVPALVERIGAQVVVEKQGGGQSVVSVRAYV
NT seq
3732 nt
NT seq
+upstream
nt +downstream
nt
atgcgcattttagcgattagaggtaaaaatttagccagtttagccaatgaatttgaagta
ctactagaggcaggtacactacaaaaagtgggcttgtttgctattaccggacccactggt
gcaggtaagagtactattttagatgctttgtgtttggctttatacgatcaaatgccacgt
ctgccagaaggacatggtgtggctattggccataaagatgaagatgaggcggtacgtgtt
aaaagtcatgatgtcagttcgatattacgtcgtggcaccgcgagtgcctttgcagaagtg
gattttattggtcaagataaacaaagctatcgcgcccgttgggagttgagccgagcacgt
aataaagtcggtggacgtttgcaggcgcagcgcatgagcttggtcaatattaatagccaa
gaaaaatttggccaaggtaaaaaagatacccagcaagaaattgttaagcgtcttggtctt
aattttgcacaatttcgacgttcggtgttattggcgcaaggtgattttgccgccttctta
aaagcgaaaaaagatgaacgctccagtttattggaaaaaattactggcaccgatatttat
agtgaattatccattgctgcttttgaacgcgctaaactggagaagctacacttagataat
atccaagaaaaattagccgataaagtgcccttaacaactgaggccagagcagaattaaat
aacgaacatttacagctcagcgaacaattaacggctctacaacaacagcaaaaaatcaaa
caacttattctggattggtttacctgtttggcgaaactaacagtagatcagcaacaagcg
cagcaacaatgtcagcagcaacaggagagctggaatgataatagctctgaccgcgagtta
ttgactcaagttgaattagtacaacctttgcgtccactattacaacaagttttaagcttg
agtacagaatgtgcagaagcacagcttaaattaacagatagtgaaacgacacttattaag
gccgaacaaactgttaatgatgtaagccagcaggtgcaaattaaacagcaacagtttgtc
cgtgctgaaagcagttttaatgccgctcaacccatcttaatcattgcccgggaactggac
actaaaattgctaatagccaagcgcgattacaagacctgcaacaagaagtcagcagccaa
caagaaaaatggcaaacggcggatgctaaggtaaccgaactcagcactcagcaagaacag
caacgccaacaattacagcaattgcaaatctggcaagaacagcatatggatctacaagct
gtagctaatgaatggggacgttgggaaagtaatatccaagattatttagcacaacaacaa
gctttaatagagcaacaagcaaatcatacccaactggaaaataatattgcggcacaacaa
accgagctcagtagtttacaaactgccagtgaattatgcttagctaaagaacaacaatta
agtgccgagttgctggcactagaacagcaatcggatagtcaggcccttagcgatttgcat
caacagcaagcacaacttgaaactcagcaagcggaatgtaaaagtactgtttctttagct
gaacaaggcttggcactacagctcgatctacacaatactcaaactgcattaacaacaaac
gagcaaactttacaacaagccaatacccaaatagaacagctgatcgtacaacaagacaat
aaacaaggccagctacaagaagcacaacatgcttttaatttaatgcatgctgccagccag
aaaactgctcaagatttacgtgccttattaatgaccgaacagccctgtcctgtttgtggt
gcgaatgaacatccttgggccgacactcatttagaagttctgcaacaacctgtcgctgaa
cagcaagcacgggttgaacagttgaccgctgcaaaagagcagttagtcagtgaattaagt
actcagcaaagtttagttaaacaagccaagcaagaacaaggtcagttaactaaaaccaaa
caacacactgaacaacgcttaaatgaactggcgaagcaatggttgttaattgggttagaa
aataagcctacttggctgaatttacaagcagcagatattactcagttacagcagcagagt
gctcggttgcacgcgcaatacatcgctattaaaaaccaagttagtttggctttggattta
caaacacaaattacggcagtgcgtagccagcgagatgctgccaatcagcaacatattgaa
caacgtcttaaaacaacagaattagataagaatatagcggaacaattaagtaccttagct
gccaatagtaacagtattcaacaactagaaaccaagctactccatattgaaaccatactg
aatacaccactacaacaactggataactggcaaacagaattaagcgaagcaggtgctgat
tttttacaacaattacgtgattcaatggttctgtggcaaaacaatagccagcagcaggaa
ctactcaataaagacttaaaccaaattaaacatgatttagccatagccagcacagccgcc
gaacagcaacaccacctcggtttacaactacaacaagagttgcagcaacataatacacaa
caacaagatttactgactgaccggcaacagtattgccaaggattacctgctaatgattat
gcccgtaatgtagaacagcagttacaaacggcaggcaaccataaacaacaagcagaagct
gaattgtccacagcacatagcgaaactaaaacttggcaaagcacggtacagcactggcaa
acagaacaacaacgccgtttagccaagcaagatagcactgaacaagaactgcaaacagag
ctaagtaatttacaattaactaaagcaacagcccaggagttattaagcaaagatgcagat
tggatcaccacccaaaagcaacagagtgcgaccttaacgcaagcattacaagaagcacaa
gccaacttaaaagtaagcactacacatttgcaagagcatgagcaacataccccgctcgaa
caagaatcgttagtgattactcagttggaaaaattgcaaagtgagtacgaaattttaagc
tcagaaaaagataataaaatatttttgctacgttcggatgatgaaaaaattgcggcaggc
aaccacttgcaggcacaattaagccagcaaacgcatatttatgagcagtgggaaagcctg
aatgaattgattggttctaaaagtgggcaaaaatttcgtacctttgcgcaaagcttaacc
cttgaaaccttgctgtcttataccaatcggcacttacaagaatttgccaaacgttatgtt
ttacagcgcgtacctggtagtgaactggaactgcaagtaatcgaccgtgatatggcggat
gaagtgcgcagtattcatagcttatcggggggcgaaagttttctggtggcactggcactg
gctttaggtttggcttcgttatcgtccaataaaactcaagtagaatccttatttattgat
gagggctttggtagtttggatcaagaaaccttagatattgcgttggcaagtttagatact
ttgcaatcattaggccgtaaagtgggagtcatttcacatgtgcctgctttggttgaacgc
attggtgcgcaagttgtggtagaaaaacaaggcggtggacaaagtgtggtttcggttcgg
gcttatgtgtaa
DBGET
integrated database retrieval system