Methyloprofundus sp. INp10_methR40d: methR_P3948
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Entry
methR_P3948 CDS
T07025
Name
(GenBank) exodeoxyribonuclease V beta subunit
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
mein
Methyloprofundus sp. INp10_methR40d
Pathway
mein03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mein00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
methR_P3948
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mein03400
]
methR_P3948
Enzymes [BR:
mein01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
methR_P3948
DNA repair and recombination proteins [BR:
mein03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
methR_P3948
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PDDEXK_1
ResIII
AAA_12
Beta-prop_TEP1_2nd
Motif
Other DBs
NCBI-ProteinID:
BCG66072
UniProt:
A0A7R6WC03
LinkDB
All DBs
Position
4375552..4379142
Genome browser
AA seq
1196 aa
AA seq
DB search
MMLSKHAQCYILTFLQLNPVDNMTLAEQHFDPIATELKQGINLLEASAGTGKTYAIAMLA
LRFVVEQDLAIDKLLIVTFTKAATKELKERVRARLVEAKQFLTGSQQGTVDTNIELWAEQ
LISQADISEELAIQRINKALLNIDQAGIFTIHGFCQRLLKEHALESGQMFDVELSDEVAS
VRQQMAEDFWRVQIYPRDAWDVALLCHEYSTPDALLASLGNLTSGITVYPEVADLDVCLT
QLKSYALAAKNQLDKQGELLAESVAAGHFKKPLTDKFEGAYTALKLWLNATATADQYFNV
SKPEVSYFKLFTSDNLDKEIRVAHKDKLDFDGSAFDDLYANLQQVSLILRRALAEKLQSE
LDIRLQQLNIMAHDSLISRTAEALSASGGDLLVQVIYAQYQVALIDEFQDTDQTQWHIFS
RLFAAPEQYLYLIGDPKQAIYKFRGADIHTYLTAKEQAQQHYTLGNNWRSNPDLVQAINH
FFSINSNPFFFAGLEFNAVSPGLTKENGGLTQHGQALAPLVVWQLAESDSSTGYWSAGKA
ATEIKLAISNEILALLSDGFAIQKAEQAQAVQPGDIAILVRTNAQAKLYQDCLKEAGIPA
VLNSTASVFKSSTAKHLYQLMQALAQPSDMGLFKQALTLSWFAFDGQQLQQILNDEVQLG
AWLSRFQEYHLLWQKKGFMPMMLQVLRQENIRVHLTQNQHAERQMTNLHHLVELTQQASL
DEHLGIHKTLAWLRRAIAAETAADEQQLRLETDADAVKIVTMHRSKGLEYPIVFCPYLWN
RSDRLGKEKQLISCHAGEEMIADLGSVDFEAHRAIALEEELAEDLRVLYVALTRAKYRCY
ITWVNERSAKKPNQSALAYLLTKQDSFAELDFSEQQTALQQLAVDYPENFTYQLVAADNQ
LAGDYQNTAIFTDLVVRTKQRHLYSAWQMSSYTALSYLSQHDAPELPVDKAEEFESMEPA
IEPEALELAKGAHTGNVLHDLLENIDFRTLAERVDISEQRDIACQRYGLQVENPELINEL
LYQTVSTSLDCDDKNFTLENIKPASCLKEMPFYLKLAEFSTEQINFILQDIPACQPLSTK
QMQGFLTGFIDLIFEYQGRYYVLDYKSNALTDYQPESLLQSMHEHNYGLQYWIYSVVLHQ
YLQQRLADYQFAEHFGGVRYLFLRGMQEQQAMSGVFSVLPDEQLVVELADVFAEAS
NT seq
3591 nt
NT seq
+upstream
nt +downstream
nt
atgatgctgtcaaagcatgcgcagtgctatatactgacatttttacaacttaatcctgta
gataacatgaccctagctgagcaacattttgatccgattgccacggaactaaaacaaggt
attaatttattagaagccagtgcgggtacgggtaagacttatgcgattgctatgttggct
ttgcgctttgtggtcgaacaggatttggcaatagacaagctgcttattgttacttttacc
aaagcagccactaaagagttaaaagaacgtgtgcgtgccagattggtggaggctaagcaa
tttttgacaggcagtcagcaaggtactgtcgacactaatatcgaattgtgggcagaacag
ttaattagccaagcagatattagcgaggaattagctattcagcgcatcaacaaggcttta
ttgaatatagatcaagcaggtatttttaccattcatggtttttgccagcgtttgttaaaa
gaacacgctttagaaagcgggcaaatgtttgatgtggagcttagtgatgaagtcgcgagc
gtacgccagcaaatggcagaagatttttggcgcgtacaaatttatccgcgcgatgcctgg
gacgtggcactactttgtcatgaatacagtacgccagatgcgttattggctagtcttggc
aatttaacaagtggtattacggtttatcctgaagttgctgatttagatgtatgcctaaca
caacttaaatcctatgcgttagcagcaaaaaatcaattggataagcaaggtgaattattg
gctgaaagtgttgcagcaggacattttaaaaagccactgaccgataaatttgagggtgcg
tatactgcacttaagctctggttaaatgccacggctacagcagatcaatattttaatgtc
agcaagcctgaggtaagttatttcaagctgtttaccagtgataacttggacaaggaaatt
cgggttgcccataaagataaattggattttgatggcagtgcttttgatgacttatatgca
aatttgcaacaagtcagtttgattttgcggcgtgctttggccgaaaaactgcaaagtgaa
ttagatattcgtttgcagcaattaaatatcatggcgcatgatagtttgatttcacgtact
gccgaagccctgtcagcatcaggtggtgacttattggtacaagtcatctatgcgcaatat
caagtggctttaatagatgaatttcaagataccgaccaaacgcaatggcacattttctcg
cgtttatttgcagcacctgaacaatatttatatcttataggtgatccaaagcaggccatt
tataaatttcggggtgctgatattcatacctatttgacagctaaagagcaagcgcaacaa
cattatactttgggaaataactggcgctctaaccctgatttagtacaggctatcaatcat
ttttttagcatcaatagcaatccttttttctttgcaggtttagagtttaatgcggtttct
cccgggctaactaaagagaatggtggtttaactcagcatggccaagcacttgcgcctttg
gtggtatggcaattagcagaaagtgatagtagtacaggctattggagcgcaggaaaagcc
gctaccgagattaaactggcgattagcaatgaaattttggctttattgagtgatgggttt
gccatccaaaaagcggagcaggcgcaagcagttcaacctggggatattgccattttagtg
cgtactaatgcgcaggcaaaattgtaccaagactgtttaaaagaagcaggcatccctgcg
gtactcaatagtaccgcttctgtctttaagagtagcaccgccaagcatttatatcagttg
atgcaagcattagcgcagccaagtgatatgggtttatttaagcaggcgcttaccttgtct
tggtttgcttttgatggtcagcaattacagcagattctcaatgatgaagtgcagttaggt
gcatggctaagtcgctttcaagagtaccatttactttggcagaaaaaaggttttatgccg
atgatgctgcaagtcttgcggcaggaaaatattcgggtacatttaacacagaaccagcat
gcagaaaggcaaatgaccaacttgcatcatttagtagagttaacgcagcaagcaagttta
gatgagcatttaggcatccataaaaccttggcatggctgcgtcgtgcgatagcggcagag
actgctgctgatgaacagcaactgcgtttggaaaccgatgctgatgctgtgaaaattgtg
accatgcatcgctcaaaaggcctggaatatcctattgttttttgcccttatttatggaat
aggagtgatcgcttaggcaaagaaaaacagctcatcagttgtcatgctggcgaggaaatg
attgccgatttaggttcggtagattttgaagcacatcgagcaattgcactagaggaagag
ttggctgaggatttgcgggttttatatgtggcgttaacgcgtgctaagtatcgttgttat
attacttgggtaaatgagcgttctgccaaaaaaccgaatcaatccgctttagcttattta
ttaactaagcaagattcttttgctgaattggatttttctgaacagcaaacagcattgcag
cagttggctgtggattatcctgaaaatttcacttaccaactagtggcggcagataatcaa
ttggcaggtgactatcaaaatactgccatatttactgatttagtggtgcgtactaagcaa
cgacacctatacagcgcttggcaaatgagtagctatacggcattgtcctatttaagccag
catgatgcacctgagttgcctgttgataaagcagaagaatttgagagtatggagccggct
attgagcctgaggctttggagctagcgaaaggagcgcatacagggaatgtgctacatgat
ttattagaaaatattgattttaggactttggctgaacgtgtagatattagtgagcaacgt
gatattgcttgtcagcgttatggtttacaagtagaaaatcctgagctaataaatgagttg
ctctatcagacggtgtctacatcattggattgtgatgataaaaactttacacttgagaat
attaagcctgcaagttgcctaaaagaaatgccgttttatttaaagctagctgaattttct
actgagcagattaattttattttacaggatattccagcttgccagccattatcaaccaag
caaatgcagggttttttaacagggtttattgatttgatttttgaataccaaggcagatat
tatgtgctggattataagagtaatgccttaactgattaccaacctgagagcttgttgcag
tccatgcatgagcataattatggcttgcaatactggatttatagtgtggtattgcaccaa
tacttgcagcagcgtttagccgattatcaatttgctgaacattttggtggggtgcgttat
ttgtttttgcgggggatgcaagagcaacaggcaatgagtggggtttttagtgtgttgcct
gatgagcagctagtggttgaattagcggatgtatttgcagaggccagttag
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integrated database retrieval system
