Methanosphaera sp. ISO3-F5: PXD04_00475
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Entry
PXD04_00475 CDS
T09686
Symbol
top6B
Name
(GenBank) DNA topoisomerase VI subunit B
KO
K03167
DNA topoisomerase VI subunit B [EC:
5.6.2.2
]
Organism
meis
Methanosphaera sp. ISO3-F5
Brite
KEGG Orthology (KO) [BR:
meis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
meis03032
]
PXD04_00475 (top6B)
Enzymes [BR:
meis01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
PXD04_00475 (top6B)
DNA replication proteins [BR:
meis03032
]
Prokaryotic type
DNA Topoisomerases
PXD04_00475 (top6B)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topo-VIb_trans
HATPase_c
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
WQH65315
LinkDB
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Position
complement(1783072..1784760)
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AA seq
562 aa
AA seq
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MERDTNDIFEEFKELTPSEFFKRNKQMLGFSGKIRSLTIVFHELITNSLDACEEVGILPD
ITIELKRLGKDHYLLKHADNGPGIPEDYITKVYCQMFAGSKFRNIQSRGQQGLGCSGCVL
LSQMTTGQPVKIRSRYKDGDELKGVEMSVKLDVKKNTGIILDRQEFETDRTGSGIEIEFK
DVSYSMSEQGAYEYIRRTVIGNPHAKIVFKDPTGRKYTFDRATDQIPPLPKAVLPHPKGV
TADDIIDLCKTTNKKRFKNLLMDSLSRVSAAKIKELEEATGIDMNKRPKSITWQEAEKVV
QQFEQMKFMAPPTSGLKPIGDEQIEKGINEILLPEFSTAITRKPQAYRGGVSFIVEAGIA
YGGKAGRLVGQQKKAEIMRFANRVPLTFDQGSCAITEALKSIDWRRYGVRNLDDAPISVF
VNIISTNVPYLSTGKQSVAPEEEIVREIRQATMKIARKLEKYIRTKKAAKNEEMRAKIFE
DLVPVVIKQSALLAEKDVPEYEKIMDEVTHKAKIMDMKHRLKQPEIEPMQIKVEEQKMRM
KTEMEELAEEELSMTEQIDEEE
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
ttggaacgtgacacaaacgacatattcgaagaatttaaggaactaacaccatcagaattt
tttaaaagaaacaaacaaatgttaggattttcaggaaaaataagatccctaaccatagta
ttccacgaactaataacaaacagcctagacgcatgcgaagaagtaggaatactaccagac
ataacaatagaactaaaaagactaggaaaagaccactacctactaaaacacgcagacaac
ggaccaggaataccagaagactacataacaaaagtatactgccaaatgttcgcaggaagt
aaattcagaaacatacaatcaagaggacaacaaggactcggatgtagcggatgcgtactc
ctatcacaaatgacaacaggacaaccagtaaaaatcagatcaagatacaaagacggagac
gaactaaaaggagtcgaaatgagcgtaaaactcgacgtaaaaaagaacaccggaatcatc
ctagacagacaagaattcgaaacagacagaacaggatcaggaatcgaaatagaattcaaa
gacgtatcatactccatgagtgaacaaggagcatacgaatacataagaagaacagtaata
ggaaacccacacgcaaaaatagtattcaaagacccaaccggaagaaaatacacattcgac
agagcaacagaccaaataccaccactaccaaaagcagtactcccacacccaaaaggagta
acagcagacgacataatagacctatgtaaaacaaccaacaaaaaacgattcaaaaacctc
ctaatggactcactcagcagagtatcagcagcaaaaatcaaagaactagaagaagcaacc
ggaatcgacatgaacaaacgaccaaaaagcataacatggcaagaagcagaaaaagtcgta
caacaattcgaacaaatgaaattcatggcaccaccaaccagcggactaaaaccaatagga
gacgaacaaatagaaaaaggaatcaacgaaatactactaccagaattctcaacagcaatc
accagaaaaccacaagcatacagaggaggagtatccttcatcgtagaagcaggaatagca
tacggaggaaaagcaggaagactagtaggacaacagaaaaaagcagaaataatgagattc
gcaaacagagtaccattaaccttcgaccagggaagctgtgcaataacagaagcactaaaa
agcatagactggagaagatacggagtaagaaacctggatgacgcaccaatatcagtattt
gtaaacataatctcaacaaacgttccatacctctcaacaggaaaacaaagtgtagcacca
gaagaagaaatagtaagagaaatcagacaagcaacaatgaaaatagcaagaaaactagaa
aaatacataagaaccaaaaaagcagcaaaaaacgaagaaatgagagcaaaaatcttcgaa
gacctagtgccagtagtaatcaaacaatcagcactcctagcagaaaaagacgttccagaa
tacgagaaaataatggacgaagtaacacacaaagcaaaaatcatggacatgaaacatcgt
ctaaaacaaccagaaatagaaccaatgcaaataaaagtagaagaacagaaaatgagaatg
aaaacagaaatggaagaacttgcagaagaagaactgagcatgacagaacaaatagacgaa
gaagaatag
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