Methanosphaera sp. ISO3-F5: PXD04_01210
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Entry
PXD04_01210 CDS
T09686
Name
(GenBank) transcription elongation factor Spt5
KO
K15172
transcription elongation factor SPT5
Organism
meis
Methanosphaera sp. ISO3-F5
Brite
KEGG Orthology (KO) [BR:
meis00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
PXD04_01210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
meis03021
]
PXD04_01210
03019 Messenger RNA biogenesis [BR:
meis03019
]
PXD04_01210
Transcription machinery [BR:
meis03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
PXD04_01210
RNA polymerase I system
PXD04_01210
Messenger RNA biogenesis [BR:
meis03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
PXD04_01210
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spt5-NGN
KOW
NusG
KOW1_SPT5
DUF8590
Motif
Other DBs
NCBI-ProteinID:
WQH64443
LinkDB
All DBs
Position
1959364..1959807
Genome browser
AA seq
147 aa
AA seq
DB search
MFYAMRAAIGQEKNVASLLAQSVKYEDLGIKAILSPEGMQGYIFVESTETLDMRHPALKV
PNLRGLVEGDMAFEELQKFLNPEPAMSNIQKGSIVELTSGPFKDEKAKVVRIDETKEDVV
LELIEAAVPIPVTVKGDQIRLIQREAE
NT seq
444 nt
NT seq
+upstream
nt +downstream
nt
atgttttacgcaatgagagcagcaataggacaagaaaaaaatgtagccagcctactagca
caaagtgtaaagtacgaagacctcggaataaaagcaattttatcacccgaaggaatgcaa
ggatacatttttgtcgaatccacagaaacattagatatgaggcatcctgcacttaaagtt
cctaacttgaggggtttagtcgaaggtgacatggcttttgaagagcttcaaaaattcttg
aaccctgaaccagcaatgtccaacatccaaaaaggaagcattgtagaattaacatcagga
ccattcaaggacgaaaaagcaaaagtagtcagaatagacgaaacaaaagaggatgttgtg
ctcgaattaatcgaagcagcagtaccaataccagttaccgtgaagggtgaccaaatcaga
ttaatacaaagggaggctgaatag
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