Methanosphaera sp. ISO3-F5: PXD04_01680
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Entry
PXD04_01680 CDS
T09686
Name
(GenBank) winged helix-turn-helix transcriptional regulator
KO
K07730
putative transcriptional regulator
Organism
meis
Methanosphaera sp. ISO3-F5
Brite
KEGG Orthology (KO) [BR:
meis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
meis03000
]
PXD04_01680
Transcription factors [BR:
meis03000
]
Prokaryotic type
Helix-turn-helix
Other families
PXD04_01680
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DUF7839
HTH_24
MarR_2
MarR
HTH_Crp_2
HTH_11
TrmB
HTH_IclR
HTH_5
Fe_dep_repress
DUF7343
HTH_27
HTH_36
Rrf2
HTH_23
HTH_34
HVO_A0261_N
DUF7123
GntR
HTH_20
Sigma70_r4_2
DnaD_N
NirdL-like_HTH
HVO_A0114
HTH_45
HTH_3
LexA_DNA_bind
KORA
HTH_PafC
DUF1389
Mnd1
Motif
Other DBs
NCBI-ProteinID:
WQH64530
LinkDB
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Position
2058531..2059322
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AA seq
263 aa
AA seq
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MRIFKNKGEFTKFQILAKIAQQEPHLKQKDIAEELGITVQAVSENIKTLVKEGYVETGSS
NFRYKITKYGIDKVKTEAINLKAYSDMVLNTMNGYKSIWPAIAAEDLHQGEQVWLNMDDG
ILYADTEDKSGAYAEVFSDALEGEDVTLINLGGEIDLVPKDVVIVKIPPISEGGSRACDM
DRIQEIYDQEFDRIGVLGTSARAITNHLNVYPDFEFATASATASAAEKGLRVLVFAVGKM
TNRIISKLEDKGIVYTIEDVKKV
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgagaatttttaaaaataaaggggaattcactaaatttcaaatattagcaaaaatagct
caacaagaaccacatttaaaacaaaaagacatagcagaagaattaggaattaccgtacaa
gcggtttccgaaaacataaaaacattagtaaaagaaggatatgtggaaactggaagttct
aattttcgttacaaaatcacaaaatatggtatagacaaagtaaaaaccgaagcaatcaac
ctaaaagcatactctgacatggtcttaaacactatgaatggatataaatcaatctggccg
gcaatagctgcagaagatttacatcaaggtgaacaagtatggttaaacatggatgatgga
atattatatgcagatacagaagataaatccggagcatacgcagaagtgtttagtgatgca
ttagaaggagaagatgtaacattaatcaaccttggtggagaaatagatttagttcctaaa
gatgttgtaatagtaaaaattcctccaatatctgaaggtggatcaagagcttgtgacatg
gacagaatccaagaaatctatgaccaagaatttgacagaattggagtactaggtacaagt
gcaagagcaatcacaaaccatttaaatgtataccctgactttgaatttgcaacagcaagt
gcaacagcaagcgcagcagaaaaaggattaagagttctagtatttgctgttggtaaaatg
actaacagaataatttcaaaactagaagataaaggtattgtatacacaattgaagatgtt
aaaaaagtttaa
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