Methanosphaera sp. ISO3-F5: PXD04_02155
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Entry
PXD04_02155 CDS
T09686
Name
(GenBank) ATP-binding protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
meis
Methanosphaera sp. ISO3-F5
Brite
KEGG Orthology (KO) [BR:
meis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
meis03400
]
PXD04_02155
DNA repair and recombination proteins [BR:
meis03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
PXD04_02155
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Paralog
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Motif
Pfam:
DUF87
HAS-barrel
AAA_10
HerA_C
T4SS-DNA_transf
TrwB_AAD_bind
Motif
Other DBs
NCBI-ProteinID:
WQH64620
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Position
complement(2153167..2154687)
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AA seq
506 aa
AA seq
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MTDIIGRCYGETSPNSLSFISKKTPTVNEYVYIEHDGRTIMGIIDTLLRGSFTLSDDLLD
EDSIGRIIDIEGQSDQYIRGEITILGDLETLEIPRTPAPIGTPVKKATIEQLEKLFSSQQ
GITIGGVLSQPEVKVKLDVNKMVSRHLGILAMTGAGKSNATSVIIDELLALGGTILVLDM
HSEYGKTTFKNGEKKSIPAKINPRDLSILEYKRLCNITDSATNQEKYLRDAYDIAKEKST
DGTKTVFIEDMINFAHEKANELENAERKNNSHIDAVNQVAFKLEDMIRKYRSILDSTDVS
DIVSIIEPGKVNIIGLSSLDEKASDILVKHVLTEILNRRKNAMTTGKGKTLEYPVFSIIE
EAHILASQKRNTQSKNIIGRIAREGRKFGVGLCLVSQSPKSLDSEALSQLNNLIILRLVE
PSDQAHVQKSSESLSEELLKKLPSLNVGEAIVLGQMTRVPTMVKIDEFQGRSVGNDLDII
SLWQKAKNEKEAKKEESKQFIDELGI
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgactgacataataggaagatgttatggggaaacttcaccaaactcattatcattcata
tccaagaaaacccccacagtaaacgaatatgtatacatcgaacatgatggaagaacaata
atgggaattattgacacactcctcagaggaagctttacacttagtgatgacttgttagat
gaagattccataggaagaataatagacattgaaggacaaagtgaccagtacatccgggga
gaaataacaatacttggagatctggaaacattagaaataccaagaacaccagcaccaata
ggaacaccagtaaaaaaagcaacaatagaacagcttgaaaaactattcagtagccaacaa
ggaataacaattggtggtgttctttcacaaccggaagttaaggttaaattagatgtaaat
aagatggtttcacgacaccttggaatactggcaatgaccggagcaggtaaatcaaatgca
acctctgttataatagatgaactattagcactaggaggaactatcctcgtgctagatatg
cactcagaatacggaaaaaccacttttaaaaatggtgaaaagaaaagtattcctgctaaa
ataaatccaagagaccttagcatactagaatataaaagattatgcaatattacagacagt
gcaaccaatcaggaaaaatatttaagagatgcatatgatattgcaaaagaaaaaagtacc
gatggaaccaagaccgtgtttattgaggacatgataaactttgcacatgaaaaagcaaat
gaacttgaaaatgctgaaagaaaaaataacagtcacatagatgctgtgaaccaagtagct
ttcaaactagaagatatgatacgaaaatataggagcatacttgactcaacagatgtttca
gatattgtgtcaataattgaaccgggtaaagtaaatattatcggattaagttcattagat
gaaaaagcatcagacatacttgtaaaacacgtgttaactgaaatattaaacagaagaaaa
aatgctatgaccacgggaaaaggaaaaacattagaatacccagtgttcagcataatagaa
gaggcacatattcttgcttcacaaaaaaggaacactcaatccaaaaacatcataggcaga
attgcacgtgaaggacgtaaatttggtgtaggattatgtttagtaagtcaaagcccaaaa
tcattagacagtgaagcactatcgcaacttaacaatctgatcatattaagattagtagaa
cctagtgatcaggcacacgtacagaagagtagtgaaagtttaagtgaagaattacttaaa
aagttaccttcattaaatgttggagaagcaatagtcctgggacaaatgacaagagttcct
accatggtaaaaatagatgaattccaaggaagaagtgtgggaaatgacttggatataata
agtttatggcaaaaagctaaaaatgagaaagaagcaaaaaaagaagaaagtaagcaattt
atagatgaattaggtatatga
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