Methanosphaera sp. ISO3-F5: PXD04_03630
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Entry
PXD04_03630 CDS
T09686
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
meis
Methanosphaera sp. ISO3-F5
Pathway
meis00300
Lysine biosynthesis
meis00470
D-Amino acid metabolism
meis01100
Metabolic pathways
meis01110
Biosynthesis of secondary metabolites
meis01120
Microbial metabolism in diverse environments
meis01230
Biosynthesis of amino acids
Module
meis_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
meis00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PXD04_03630 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PXD04_03630 (lysA)
Enzymes [BR:
meis01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
PXD04_03630 (lysA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
WQH64888
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Position
2495610..2496899
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AA seq
429 aa
AA seq
DB search
MSYDFNLKIKDNHLMIGELDANDLAEEFKTPLYVIDEEKVRENYNKLFTAFSSKYEDLHM
CYAAKANTSLAVLKILEDEGSYIDAVSPGEIYTALLAGFTPDRIMFTGNNVTNEELEYAH
KTGVTINLDSISALERLSTIEGTEGKEISIRVNPMVEAGHHEHCITGGPKSKFGIKEEEA
VEVYQKAIDLGFKPIGMHSHIGSEILESEPFMLAVETMMDIAGKVHQEVGVDFKFLDFGG
GFGIPYEPTENELDLEKFTTDIINLFKSKVEEYDMESPSFYIEPGRFLVGNAEVLLTRVN
TIKESYRKFAGVDCGFGTLLRPTMYGSYHHIVVANKMNEENVEEIDIAGNLCESGDLFAR
DRPMPKLEEGDLLAILNAGAYAYSMASQYNSRPRPAEVLVNKKEADVIRRRESFSDLFNG
QKVPTRLLK
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgtcatatgactttaatttaaaaataaaagataatcacttaatgattggtgaactagat
gctaatgatttagcagaagaatttaaaacaccattatatgtaattgatgaagaaaaagtt
agagaaaattacaacaaattattcactgcattcagtagcaaatatgaagatttacacatg
tgttatgcagctaaagcaaacacaagccttgcagtattaaaaatattagaagatgaagga
agttacattgatgcagtaagtcctggtgaaatatacacagcattacttgcaggattcaca
ccagatagaataatgttcacaggaaacaatgtgacaaacgaagaattagaatatgctcat
aaaacaggagttacaataaaccttgacagtatatcagctcttgaaagattaagtaccatt
gaaggaacagaaggaaaagaaatatcaataagagtaaatccaatggtagaagcaggtcat
catgaacactgtattacaggtggaccaaaaagtaaatttggtataaaagaagaagaagcc
gttgaagtttaccagaaagcaatagacctcggatttaagccaataggtatgcattcacat
ataggttctgaaatacttgaatccgaaccattcatgttagcagtagaaacaatgatggac
attgcaggaaaagtacatcaagaagtaggagttgactttaaattcctagactttggtgga
ggatttggtataccatacgagccaacagaaaatgaattagacttagaaaaattcacaaca
gacattataaatcttttcaaatccaaagttgaagaatatgacatggaaagtccatcattc
tatattgaacctggaagattcctagttggtaacgcagaagtattattaacaagagtaaat
acaattaaagaaagctaccgtaaatttgcaggagtagactgtggatttggtacactccta
aggccaacaatgtatggatcataccatcatattgtagtagcaaataagatgaatgaagaa
aatgttgaagaaattgatattgcaggtaacctctgtgaaagtggagacctatttgctagg
gataggccaatgcctaaactagaagaaggagaccttctcgcaatattaaatgctggtgca
tatgcttacagtatggcatcacaatataattcaagacctagaccggcagaagtattagtt
aacaaaaaagaagcagatgtaataagaagaagagaaagtttcagtgacttatttaatggt
cagaaagttccaacaaggttattaaaatga
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