Methanosphaera sp. ISO3-F5: PXD04_03635
Help
Entry
PXD04_03635 CDS
T09686
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
meis
Methanosphaera sp. ISO3-F5
Pathway
meis00300
Lysine biosynthesis
meis00470
D-Amino acid metabolism
meis01100
Metabolic pathways
meis01110
Biosynthesis of secondary metabolites
meis01120
Microbial metabolism in diverse environments
meis01230
Biosynthesis of amino acids
Module
meis_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
meis00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PXD04_03635 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PXD04_03635 (dapF)
Enzymes [BR:
meis01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
PXD04_03635 (dapF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
CntK_N
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
WQH64889
LinkDB
All DBs
Position
2496896..2497774
Genome browser
AA seq
292 aa
AA seq
DB search
MIKEINFTKMHALGNDYIVINETDETVIPEESKNDVCAEISQRRFNVGADGVVFACKSDK
ADVRFRIFNSDGSEAEMCGNGIRCLAKYVYDKNIVKKEVMQIETMEDVKEARLTVEDDEV
ISIEIDMGKGYFKPEEIPAIAPSGNVDEFIDEEIDVEGEKIRMSSVSVGNPHAVCFTDIN
IDDIDLDFYGPRIETHEAFPEKVNVHFVNIVSPEEINILTWERGAGFTYACGTGTTSCVL
LGYKMGLLNEKVHAHLSGGDLDITISDFTDYLTATMKGAAVSVYEASMNVEL
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgattaaagaaataaattttacaaaaatgcatgcactgggtaatgattacatagtaatt
aacgaaacagatgaaacagtcatccctgaagaatcaaaaaatgatgtatgtgctgaaata
tcacagagaagatttaatgttggtgctgatggtgtagtttttgcatgtaaatctgataag
gctgatgtaagattccgtatcttcaatagtgatggtagtgaagctgaaatgtgtggaaat
ggtattcgctgtcttgctaaatatgtttatgataaaaacattgttaaaaaagaagtaatg
caaattgaaacaatggaagatgtgaaggaagctagacttacagtagaagatgatgaagtt
attagcatagaaattgatatgggtaaaggatactttaaaccagaagaaattcctgcaata
gcacctagtggaaatgttgatgaattcatagatgaagaaattgatgttgaaggtgaaaag
ataaggatgagttcagtaagtgtgggaaaccctcatgcagtatgttttactgatattaat
attgatgatattgacttagatttctatggtcctcgtattgaaactcatgaagcatttcct
gaaaaagtgaatgtgcactttgtgaatattgtttctcctgaagaaattaatattttaact
tgggaaagaggtgctggattcacttatgcttgtggaacaggtactactagttgtgttctt
cttggttataaaatgggtttacttaatgagaaagtacatgcacatttatctggtggtgac
ttagacatcacaattagtgattttactgattacttaacagctactatgaaaggtgctgct
gttagtgtatatgaagctagtatgaatgttgagttataa
DBGET
integrated database retrieval system