Methanosphaera sp. ISO3-F5: PXD04_05670
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Entry
PXD04_05670 CDS
T09686
Name
(GenBank) tRNA uridine(34) 5-carboxymethylaminomethyl modification radical SAM/GNAT enzyme Elp3
KO
K07739
elongator complex protein 3 (tRNA carboxymethyluridine synthase) [EC:
2.3.1.311
]
Organism
meis
Methanosphaera sp. ISO3-F5
Brite
KEGG Orthology (KO) [BR:
meis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
meis03016
]
PXD04_05670
Enzymes [BR:
meis01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.311 tRNA carboxymethyluridine synthase
PXD04_05670
Transfer RNA biogenesis [BR:
meis03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
PXD04_05670
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM_C
ELP3_N
Radical_SAM
Acetyltransf_1
Acetyltransf_10
Acetyltransf_7
Motif
Other DBs
NCBI-ProteinID:
WQH63205
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Position
420106..421731
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AA seq
541 aa
AA seq
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MEEACRLIIKKAIDNNISTKKELEKLKIQTCRELNLPGFMSNSKILQHAKPNEIELLRPI
LMKKPSRTISGVAIVAVMCSPHKCPHGRCKYCPESSIAPPSYTGEEPAALRARMFEFHPY
IQTFNRLYQLNNIGHPIDKVELIIMGGTFASRTLDYQEWFVTQCLKAMNDFEKVSSQIPK
NQKEINIIPPTDFTYLSDAQKINEHSKVRCVGLTFETRPDYSKREEINRMLNYGVTRVEL
GVQTLYNYRYKCVDRGHTIQDVVEANQLLRDSGIKVAMHMMPGLLSTFDSDLNMFKRLFT
EPSFSPDMLKIYPCLVTEGSEFYEMWKRGEYEPYTSEQAVDLIVEIKKILPKWVRTMRIQ
RDIPATLIDAGVKKSNLGELVYNRLEEEGVQCQCIRCREVGHKKAHGVEPDYSNIELLRT
DYDVTNGKEIFLSFEDPENDVLIGFIRLRIPSKNIFRSEITNSSALIRELHVYGQMQEIG
KKDDMLWQHKGYGSELLKEAEKIAKEEFNKDKILVISGIGVRDYYRKFGYHKDGPYMSKF
I
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagcatgtagattaattattaaaaaagcaattgataacaacatatctacaaaa
aaagaattagaaaagttaaaaattcaaacatgtagagaattaaatttaccaggtttcatg
agtaattctaaaatattacaacatgctaaacctaacgagattgaactattaagaccaatc
cttatgaaaaaaccatcacgtacaatatcaggggttgcaattgtagcggttatgtgcagt
ccacacaaatgtcctcatggaagatgcaaatactgtcctgaaagtagtattgcaccacct
agttacacgggtgaagaaccagcagcccttcgtgcacgaatgtttgaatttcatccatat
attcaaacttttaacagattataccagttaaacaatataggacatcctattgataaggta
gaattaattattatgggaggaacctttgcttccagaacattagattatcaggaatggttt
gtaacacaatgtttaaaagcaatgaatgactttgaaaaggttagttcacaaatacctaaa
aatcagaaagaaataaatattattcccccaacagatttcacatatctatctgatgctcaa
aaaataaatgaacatagtaaagtaagatgtgtaggattaacatttgaaacaagaccagat
tattctaaacgagaagaaattaatagaatgttgaattatggagtaacacgagtagaatta
ggagttcaaacattatacaattacaggtataaatgtgtagacaggggacatactattcaa
gatgttgttgaagctaaccaattactcagagattctggaataaaagtagcaatgcatatg
atgccaggcttattatcaacatttgacagtgacttgaacatgttcaaaagattatttacc
gaaccatctttttcaccagacatgttaaaaatatatccttgcctagtgacagaaggatct
gaattttatgaaatgtggaaaagaggagaatatgaaccttatacttcagaacaagctgtt
gatttaatagttgaaattaaaaaaatattaccaaaatgggtaagaactatgcgtattcag
cgggatataccagcaactttaatcgatgcaggagtaaaaaaatctaatttaggggaactt
gtttataatcgattagaagaggaaggtgttcaatgtcaatgtataagatgtagggaagta
ggtcataaaaaggcacatggtgtggaacctgattattctaatattgaattattaagaaca
gattatgatgttacaaatggtaaagaaatattcttatcatttgaagacccggagaatgat
gtgttaattggttttataagattacgaattccttctaagaacatattccgttcagaaatt
acaaatagcagtgcattaattagggaattacatgtgtatggacaaatgcaggaaattggt
aaaaaggatgatatgttatggcaacataaaggttatggttcagaattattgaaagaggct
gaaaaaatagctaaagaagaatttaataaggataaaatattagttattagcggaatagga
gtaagagattattataggaaatttggttatcataaggatggtccttatatgtctaaattt
atttaa
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