Methanosphaera sp. ISO3-F5: PXD04_06165
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Entry
PXD04_06165 CDS
T09686
Symbol
endA
Name
(GenBank) tRNA-intron lyase
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
meis
Methanosphaera sp. ISO3-F5
Brite
KEGG Orthology (KO) [BR:
meis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
meis03016
]
PXD04_06165 (endA)
Enzymes [BR:
meis01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
PXD04_06165 (endA)
Transfer RNA biogenesis [BR:
meis03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
PXD04_06165 (endA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
tRNA_int_end_N2
Motif
Other DBs
NCBI-ProteinID:
WQH63297
LinkDB
All DBs
Position
complement(523835..524341)
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AA seq
168 aa
AA seq
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MYSVLNEDRVIVKHEHAHNLYNKRYYGNLTDSGLELSFIEALYLLEKNKIEIYDDNEGII
SIEHMTDIIRKKHIFSHYLVYKDLRTRGYIIKTGFKYGSDFRIYERGHAPGDGHSNYLVK
ILSEEQEIKVRDFSSYVRVAHGVRKNLLLAVVDDEYDITYYDIEWTRP
NT seq
507 nt
NT seq
+upstream
nt +downstream
nt
atgtattctgtgttaaatgaggatcgtgttattgttaagcatgaacatgcacataattta
tataataaacgttattatggaaatttaaccgattcgggtcttgaattatcatttattgaa
gcattatatttgcttgaaaagaataagatagaaatttatgatgataatgaagggattata
agtattgaacatatgactgatattattaggaaaaagcatattttttctcattatcttgta
tataaagaccttcgtacaaggggttatattattaagacaggttttaagtatggtagtgat
ttcaggatttatgaaagaggccatgctcctggtgatggacattctaattatctggtaaaa
atattatcggaggaacaggagattaaggtaagagatttctccagttatgtccgtgttgct
catggtgtgcgtaagaatttgcttcttgctgttgttgatgatgaatatgatatcacttat
tatgatattgaatggactaggccataa
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