Methanosphaera sp. ISO3-F5: PXD04_06370
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Entry
PXD04_06370 CDS
T09686
Name
(GenBank) ribosome biogenesis/translation initiation ATPase RLI
KO
K06174
ATP-binding cassette, sub-family E, member 1
Organism
meis
Methanosphaera sp. ISO3-F5
Brite
KEGG Orthology (KO) [BR:
meis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
meis03009
]
PXD04_06370
Ribosome biogenesis [BR:
meis03009
]
Eukaryotic type
Pre-40S particles
Other pre-40S particles
PXD04_06370
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Paralog
GFIT
Motif
Pfam:
ABC_tran
Fer4_RLI
SMC_N
AAA_21
nSTAND3
AAA_23
AAA
RsgA_GTPase
NB-ARC
Fer4
LdpA_Fe-S-bd
AAA_29
KAP_NTPase
Fer4_2
Fer4_9
Fer4_6
Fer4_21
Fer4_7
MMR_HSR1
Fer4_10
Motif
Other DBs
NCBI-ProteinID:
WQH63335
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All DBs
Position
590791..592566
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AA seq
591 aa
AA seq
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MSRIAILEKDKCQPKKCNYTCIEYCPGVRMEEDTIIIGEDKKPIISEELCSGCGICVNRC
VFNAINIINLPEMLQEQPIHRYGQNTFELFGMPTIEEGSVVGLLGPNGIGKSTILNILSG
QTIPNFGNYQEEGNWDKVIEHFKGSQLQNYFKKLSNNQIKIAYKPQMVDQLPKVVKGKVS
ELLEGVDERNKMEEVVEKLELQNTLNRKLGKLSGGELQRIAIAATILRDANFYYIDEPTS
WLDVKQRLNTVEVIRDLTEENRNVLVIEHDLATLDAMSDYVHVMYGEEGAYGVVSKLRGV
RVGINAYINGFLNEENIRIRKQPIEFEIRPPSDLIESETITKYTDFHKKYDNFELEVEEG
EINQSQVITAFGPNGIGKTTYAKILAGVTKPDSGEIEEEIKIAYKPQYILSDFEGTVQDF
LYMNAKGYGTNVFKTDISKPFDLDKILEKQVNKLSGGELQRLATAVTLSQEADVYVLDEP
TAFLDVEQRLKVAKAIKHLITRDDTSALIIDHDIVFIDYISDRAMVFYGESAKSGHATAP
INLRDAMNKFLSDVKITFRRDKETNRPRVNKQESYLDREQKEKGEYYYLEE
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
ttgtcacgaatagcaatattagaaaaagacaaatgtcaaccaaaaaaatgtaactacacc
tgcatagaatactgtccaggagtacgaatggaagaagacacaatcataattggagaagac
aaaaaaccaatcatctcagaagaactatgttccggatgcggaatctgcgtaaacagatgc
gtattcaacgcaataaacataatcaacctaccagaaatgctacaagaacaaccaatacac
agatacggacaaaacacattcgaactattcggaatgccaacaatagaagaaggatcagta
gtaggactactaggaccaaacggaataggaaaatcaacaatactcaacatactatcagga
caaacaataccaaacttcggaaactaccaagaagaaggaaactgggacaaagtaatagaa
cacttcaaaggatcacaactacaaaactacttcaaaaaactatcaaacaaccaaataaaa
atagcatacaaaccacaaatggtagaccaactaccaaaagtagtaaaaggaaaagtatca
gaactactagaaggagtagatgaaagaaacaaaatggaagaagtagtagaaaaactagaa
ctccaaaacacactaaaccgcaaactaggaaaactctcaggaggagaactacaacgaata
gcaatagcagcaacaatactaagagatgcaaacttctactacatagacgaaccaacatcc
tggctagatgtaaaacaaagactaaacacagtagaagtaataagagacctaacagaagaa
aacagaaacgtactagtaatcgaacacgacctagcaaccctagacgcaatgagtgactac
gtacacgtaatgtacggagaagaaggagcatacggagtagtaagtaaactaagaggagta
agagtcggaataaacgcatacataaacggattcttaaacgaagaaaacataagaataaga
aaacaaccaatagaattcgaaataagaccaccaagtgacctgatagaatcagaaacaata
acaaaatacacagacttccacaaaaaatacgacaacttcgaactagaagtagaagaagga
gaaataaaccaaagccaagtaatcacagcattcggaccaaatggaataggaaaaacaacc
tacgcaaaaatactcgcaggagtaacaaaaccagactccggagaaatcgaagaagaaata
aaaatagcatacaaaccacaatacatactatcagacttcgaaggaacagtacaagacttc
ctatatatgaacgcaaaaggatacggaacaaacgtcttcaaaacagacatatccaaacca
ttcgacctagacaaaatactggaaaaacaagtgaacaaactctcaggaggagaactacaa
agactagcaaccgcagtaacactctcacaagaagcagacgtatacgtactggacgaacca
acagcattcctagatgtagaacaaagacttaaagtagcaaaagcaataaaacacttaata
acaagagacgacacatcagcactaatcatagaccacgatatagtattcatagattacata
tcagatcgggcaatggtattctacggagaatcagcaaaaagtggacatgcaaccgcacca
ataaacctaagagatgcaatgaacaaattcctatctgatgtaaaaataacattcagaaga
gacaaagaaacaaacagaccaagagtaaacaaacaagaaagctaccttgacagagaacaa
aaagaaaaaggagaatattactacctggaagaataa
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