Methanosphaera sp. ISO3-F5: PXD04_06535
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Entry
PXD04_06535 CDS
T09686
Name
(GenBank) RNA-guided endonuclease TnpB family protein
KO
K07496
putative transposase
Organism
meis
Methanosphaera sp. ISO3-F5
Brite
KEGG Orthology (KO) [BR:
meis00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
PXD04_06535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cas12f1-like_TNB
OrfB_IS605
Occludin_ELL
HH_RND_rel
MTR4-like_stalk
ABC_tran_CTD
TRAF_BIRC3_bd
FapA
CCDC28
Ni_insertion
DMAP_binding
Motif
Other DBs
NCBI-ProteinID:
WQH63362
LinkDB
All DBs
Position
complement(622822..623388)
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AA seq
188 aa
AA seq
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MGVSRFVTINTGKIIQFPQQNKIAQLNNRIRRLQRKLSKKEFGSKNYNKIKKKIAQTYEK
RHNILDYHFYKIAQRLTEKYQVICMETLNIKGMLKNSRLSKSIQEKSWHMFTKIIEQKAY
EHGRKLIHINQWYPSSKTCNNCQYYNEDLTLNNRTWTCTQCGNKHDRDINAAKNIHHEGL
KKIKQNHY
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
ttgggagtatcacgttttgtcacaataaacacgggcaaaataatacagttcccacaacaa
aacaaaatcgcacagctaaataatagaatacgaagattacaaagaaaactatccaagaaa
gaatttggcagcaaaaactacaataaaatcaaaaagaagatagcacaaacatatgaaaaa
agacataacatactagactatcatttctataagatagcacaacgattaacagaaaaatat
caagtaatctgcatggaaacactaaacatcaaaggtatgctaaaaaacagcagactatcc
aagagtatacaagaaaaatcatggcacatgttcacaaaaataatagaacaaaaagcatac
gaacacggaagaaaactaatacacataaaccaatggtacccatccagcaaaacatgcaac
aactgtcaatactacaatgaagacttaacgctaaacaaccgaacatggacatgcacccaa
tgtggtaacaaacacgacagagacataaacgcagccaaaaacatacaccatgaaggatta
aaaaaaatcaaacaaaatcattattaa
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