Methanosphaera sp. ISO3-F5: PXD04_06855
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Entry
PXD04_06855 CDS
T09686
Symbol
ltrA
Name
(GenBank) group II intron reverse transcriptase/maturase
KO
K00986
RNA-directed DNA polymerase [EC:
2.7.7.49
]
Organism
meis
Methanosphaera sp. ISO3-F5
Brite
KEGG Orthology (KO) [BR:
meis00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
PXD04_06855 (ltrA)
Enzymes [BR:
meis01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.49 RNA-directed DNA polymerase
PXD04_06855 (ltrA)
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GFIT
Motif
Pfam:
RVT_1
RVT_N
GIIM
Motif
Other DBs
NCBI-ProteinID:
WQH63422
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Position
683712..685268
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AA seq
518 aa
AA seq
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MSKDVYADLSQNSILEDAKQNESDYTSEWNSIPWQKIERSIYKLQCDIACAEIRKEYSKA
KQLQRLLLNKDSTILYGIRRATILNSGRRTPGIDGMVLRSHPERMALYYKLKSMKLKEYE
PLPVRRVYIRKSNGKMRPLGIPTIIDRVYQTVVNLALEPRVEVGFEPTSYGFRPMRNAGN
AIARIHHFTKRGNRSWVFEGDFKSCFDTLDHDWILKQLGNFPAKNIINKWLKAGYVHNDM
FDLTDMGTPQGGIISPTLANIALTGLDEALGVTYKKEKARNTFTYRNQSRYAMIRYADDF
VVLCRTKEDAEEVYSLIEPYLKERGLKLAEDKTHITPLNKGFDFLGFNIREYPTQNGIKV
LSKPAKDRIERLKSKIRELFLKYRSSGKIDELIGKLNSLIIGTANYWKQTVAHKAFNEID
DYVWKLTYRYLRRQHPNKSWDWIKDRYFKEDYYHKHDDNYILTSPENPNIQLVKMKWVHI
HYAHIIKYNCNPYDPEYNDYIRKAFKKTPFECLYNKGN
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaggatgtttatgcagatttgagccaaaattctattttggaggatgctaaacag
aatgagtccgattatactagcgaatggaattctattccatggcagaagattgaacggagc
atttataagttacaatgtgatatagcttgtgccgaaatcagaaaagaatatagtaaagcc
aagcaattacaaagattactgttaaataaggattccacaattctgtatggtattcgaagg
gctaccattttaaatagtggtcgtagaacacctggaattgatgggatggtgcttaggtct
catcccgagagaatggctttatactataagcttaaatctatgaaattaaaggaatatgaa
cctttaccagtgcgtagggtttatattcgtaaatcaaatggtaaaatgcgaccgttgggt
ataccgaccattattgatcgtgtgtatcagactgtcgttaatcttgcccttgaaccacgt
gtagaggtgggttttgaaccaacaagttatggttttagaccaatgcgcaatgcaggaaat
gcaatcgcacgcatacaccacttcacaaaaagaggtaatcggtcttgggtatttgaaggt
gatttcaagtcatgttttgatactcttgaccatgactggatattaaagcagttgggtaat
ttccctgctaagaatatcattaataaatggcttaaagcaggttatgtacataatgacatg
tttgatttaaccgatatgggtacgccacaaggtggaataatctcgccaacattggcaaat
atagccctaacaggactagatgaagcattaggagtaacctacaagaaagaaaaagctaga
aacacattcacttatcgtaatcagtcaagatatgctatgatacgctatgcagacgatttt
gtagtactatgtagaacaaaagaagatgcagaagaagtatactctttgattgaaccatac
ctcaaagaacgtggccttaaattagcagaggacaaaacacatataacaccattaaataag
ggttttgattttctcggatttaacatcagagaatacccaacacaaaatggtattaaagtg
cttagtaaacctgctaaggacaggattgaaagactcaaaagtaagatacgagaattgttt
ctaaaatatcgtagtagtggaaaaattgacgagctaattggaaaactgaacagtctaata
atcggcactgccaattactggaaacaaacagtagcccacaaagcgttcaatgaaattgat
gactacgtttggaaattaacgtatcgatatcttcgtagacaacatcctaacaagtcatgg
gattggattaaagataggtacttcaaagaagattattatcataaacatgatgataattat
atacttactagtccagaaaatcctaacatacaacttgttaagatgaaatgggtgcatata
cactatgcacacataattaaatacaattgcaatccttatgaccctgaatataatgattac
ataaggaaagcttttaagaaaacaccgtttgaatgtctttacaacaaaggcaattaa
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