Methanosphaera sp. ISO3-F5: PXD04_07840
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Entry
PXD04_07840 CDS
T09686
Name
(GenBank) RNA-guided endonuclease TnpB family protein
KO
K07496
putative transposase
Organism
meis
Methanosphaera sp. ISO3-F5
Brite
KEGG Orthology (KO) [BR:
meis00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
PXD04_07840
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Gene cluster
GFIT
Motif
Pfam:
Cas12f1-like_TNB
OrfB_IS605
HTH_OrfB_IS605
HypA
DUF7575
CCDC28
DUF5817
Ni_insertion
Motif
Other DBs
NCBI-ProteinID:
WQH63607
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Position
917275..918384
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AA seq
369 aa
AA seq
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MKVVMYKSFVVRIYPDEVQENFFTNQFGCCRFVFNTFLDAKKKVYAENGVYLSFYDCSAM
LTELKKSKTWLKRVDSTGLIESLKNLENAFNRFFNQISKYPRYKSKYNPVQSYKTHNINN
NIRIRDKFIRLPKVGWIRFRTHQKITGQIQSVTVKRKASGKYFISILCKNVTRHVYKTNN
RSCGIDLGVSRFVTINTGKIIPFPQQNKIIQLHNKIRRLQRKLSKKEFSSKNYNKIKKKI
AQTYEKRHNILDYHFYKIAQQLTEKYQVICMETLNIKGMLKNSRLSKSIQEKSWHMFTKI
IEQKAYEHGRKLIHIDQWYPSSKTCNNCQYYNDKLKLNNRTWTCPQCGNTHDRDINAAKN
IQREGLKKI
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
ttgaaagttgttatgtataagagttttgttgttcgtatttatcctgatgaggttcaggag
aattttttcaccaatcagtttggttgttgtcggtttgtttttaatacttttctggatgcc
aaaaagaaagtatatgctgaaaatggagtgtatttgtctttttatgattgttcagctatg
ttaactgagctaaaaaagtctaaaacttggttaaaacgagttgattccacaggtttaatt
gaatcattgaaaaatttagaaaatgcatttaacagattttttaaccaaatcagcaagtat
ccacgttataaaagcaagtataatcctgtacaatcttataaaacccataatatcaataac
aatatcagaattagggacaaatttattcgtcttcctaaggtaggttggatccgatttcgt
acccatcaaaagataactggtcaaatacaatctgtaactgttaaaagaaaagcatcaggc
aaatattttatttctatcttatgtaaaaatgttacaagacatgtttataagactaataat
cgtagttgtggtatagatttgggagtatcacgttttgtcacaataaacacgggcaaaata
atacctttcccacaacaaaacaaaatcatacaactacacaataaaatacgaagattacaa
agaaaactatccaaaaaagaatttagcagcaaaaactacaataaaatcaaaaagaaaata
gcacaaacatatgaaaaaagacataacatactagactatcacttctataagatagcacaa
caattaacagaaaaataccaagtaatctgcatggaaacactaaacatcaaaggcatgcta
aaaaacagcagactatctaagagcatacaagaaaaatcatggcacatgttcacaaaaata
atagaacaaaaagcatatgaacacggaagaaaactaatacacattgaccaatggtacccc
tccagtaaaacatgcaacaactgccaatactacaatgacaagttaaaactaaacaaccga
acatggacatgtccacaatgtggaaacacacatgacagagacataaacgcagccaaaaac
atacaacgagaaggattaaaaaaaatataa
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