KEGG   Methanosphaera sp. ISO3-F5: PXD04_08090
Entry
PXD04_08090       CDS       T09686                                 
Symbol
cas6
Name
(GenBank) CRISPR-associated endoribonuclease Cas6
  KO
K19091  CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-]
Organism
meis  Methanosphaera sp. ISO3-F5
Brite
KEGG Orthology (KO) [BR:meis00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:meis02048]
    PXD04_08090 (cas6)
Prokaryotic defense system [BR:meis02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Subtype I-A factors
    PXD04_08090 (cas6)
   Subtype I-D factors
    PXD04_08090 (cas6)
SSDB
Motif
Pfam: Cas_Cas6_C
Other DBs
NCBI-ProteinID: WQH63653
LinkDB
Position
complement(982613..983320)
AA seq 235 aa
MRLLIKFNPLCNEDYFIIGKYDIQGFIYSLIKDTEFGDYHDLKGFKFFTFSNIFPLGDFK
LGEKKQLIISSPSSAFIKLLYHIISGMEVFRLNKFFMEIVSVNILKNSKMKRQIISGTPI
VLYENNLDNRYYSFKSNMDFNFFFDRLSDNAVKKFNAYYDDEFVLNDSLFSSFEFNREVS
VRMQIHHNKFIIIGSLWNLFEVEINQENRKFYNFLFDCGLGEKNSLGFGFVNNRR
NT seq 708 nt   +upstreamnt  +downstreamnt
atgagattgttaattaagtttaatccgttgtgtaatgaagattactttataataggtaaa
tatgatattcaagggtttatctattctttgattaaggatacagagtttggtgattatcat
gaccttaaagggtttaaatttttcacattttctaatatatttcctcttggcgattttaag
ttaggtgaaaagaagcagttgattatttcttcaccgagtagtgcttttattaaattgtta
tatcatattatttcaggtatggaagtatttcggttgaataagttttttatggaaattgtt
tctgtcaatatattaaaaaatagtaaaatgaaacggcaaattatttcaggaactcctata
gtcttatatgagaataatcttgataacagatattactcttttaagtcaaatatggatttt
aatttcttttttgatcgtttaagtgataatgctgttaaaaagtttaatgcatattatgat
gatgaatttgtattaaatgatagtttattttcttcttttgagtttaatcgagaagtttct
gttaggatgcagattcatcataataagtttataattataggtagtttatggaatttattt
gaagttgaaataaaccaagagaataggaaattttataatttcttgtttgattgtggtctt
ggtgagaaaaattcattaggatttggttttgttaacaataggaggtga

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