Methanosphaera sp. ISO3-F5: PXD04_09025
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Entry
PXD04_09025 CDS
T09686
Name
(GenBank) exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
meis
Methanosphaera sp. ISO3-F5
Pathway
meis03030
DNA replication
meis03430
Mismatch repair
meis03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
meis00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PXD04_09025
03430 Mismatch repair
PXD04_09025
03440 Homologous recombination
PXD04_09025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
meis03032
]
PXD04_09025
03400 DNA repair and recombination proteins [BR:
meis03400
]
PXD04_09025
Enzymes [BR:
meis01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PXD04_09025
DNA replication proteins [BR:
meis03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PXD04_09025
DNA repair and recombination proteins [BR:
meis03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PXD04_09025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
nos_propeller
Motif
Other DBs
NCBI-ProteinID:
WQH63830
LinkDB
All DBs
Position
1180805..1181770
Genome browser
AA seq
321 aa
AA seq
DB search
MDKFVVLDIESPNTYFNSVSAIGIIIVENNKITDKIYSLINPEDEFEEDIIELTGITQEM
VEDKPTFNEFWPEIEELLVTNTIIGHNITYDLTVISNSLENYNINVPDFKYICTYKLSYN
LLKLEAYSLEYIMNQLNYDYDAHNALADAEAAYYLYKHLDNLQKITPINQKIFCNKDKNS
SINEKLYPNINELYGMILEFRYKEKITENQINLFKEWINKNKEYSDIKEIKNIIIRLNSI
ITKNTLNKEDKINISTIVTSVNKSKKYSNEELNLQVLIGIIKMYKCSKENNTDEKEFLKK
WLTYYTLPNSINASILLKSLN
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atggataaatttgtagtacttgatatagaaagtccaaacacttattttaattcggtatca
gctataggtataataatagttgaaaataacaaaataactgataaaatatatagtttaatc
aatccagaagatgaatttgaggaagatattattgaactcactggcataacacaggaaatg
gttgaagataaacctacattcaatgaattttggccagaaatagaagaactactagtaact
aatactattattggacataatataacatatgatttaactgttatctctaattcattagaa
aattataatatcaatgttccagattttaaatatatttgcacctataaattatcttataat
cttctgaaactggaagcatattcattagaatatattatgaatcaattaaattatgattat
gatgcacataatgcattagctgatgcagaagcagcatattacttatataaacatctggat
aatttacaaaaaataacaccaattaatcagaaaattttctgtaataaagacaagaatagc
agtataaacgaaaaattatatccaaatataaatgaattatatggtatgatactagaattc
agatataaagaaaaaataacagaaaatcagataaatctcttcaaagaatggataaataaa
aataaggaatattcggatattaaagaaataaagaatataatcatcagattaaatagcata
ataacaaagaatacactaaacaaagaagataaaataaatatttcaacaatagttactagt
gtaaacaaatccaaaaaatattccaatgaagaacttaatttacaagttttaataggaata
ataaaaatgtataaatgtagcaaagaaaataatactgatgaaaaagaatttttaaaaaaa
tggttaacatattatacattacctaactcaattaatgcctctattctacttaaatcactg
aattaa
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