Methanosphaera sp. ISO3-F5: PXD04_10575
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Entry
PXD04_10575 CDS
T09686
Name
(GenBank) helicase HerA-like domain-containing protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
meis
Methanosphaera sp. ISO3-F5
Brite
KEGG Orthology (KO) [BR:
meis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
meis03400
]
PXD04_10575
DNA repair and recombination proteins [BR:
meis03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
PXD04_10575
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
ResIII
AAA_10
AAA
FtsK_SpoIIIE
AAA_22
Zeta_toxin
T2SSE
AAA_30
AAA_19
TrwB_AAD_bind
CbiA
AAA_16
DUF815
AAA_7
AAA_6
Motif
Other DBs
NCBI-ProteinID:
WQH64136
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Position
complement(1568747..1570366)
Genome browser
AA seq
539 aa
AA seq
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MYTENTILIGSNENKNVTLLPKLANRHGLIAGATGTGKTITLKAIAESFSDMGVPVFLAD
MKGDISGLSKIGEANEKITERIEKYDLKNKGYNFKSYPVEFWDLFGEKGIPIRVTISQMG
PNLLSKILNLTEAQEGVLNIVFKVADEESLLLIDIKDLKIMINHVTENKDKYESQYGSIS
TRSANTIIRSLLTLEEQGGNNFFGEPSLELEDFIQCDDEQKGIINVLDAVKLSLAPDLYS
TFLLWMLTQLYETLPEVGDLEKPKFVFFFDEAHLLFDGMSPVFQKKIEQIVRLIRSKGVG
LYFISQSPADIPDEILSQLGNRIQHALRAYTPKDQKAVKVAAESFRPNPAFNTQDVISSL
GIGEALVSLLDEEGVPGIVEKVDIIPPQSYNGAIDDSYRQELINISCNKEKYVQAIDRES
AYELLSQKKETVPEQVVQEPAVQEPVVQEPEVHEIQHEPVNQQPEQEEKKGFSLQDTIQQ
TINDLDFNPNTTTKRRNTGSSRNSGKSEIDKIVQSATNTIVREATRQITRGLFGQLKFK
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgtacacagaaaatacaatactaataggaagtaatgaaaataaaaacgtgacactatta
cctaagctagcaaacaggcatggattaatagctggagcaacaggaacaggaaaaacaata
acattaaaggcaatagctgaatcatttagtgacatgggtgtgccagtatttctagcagac
atgaaaggagacatatccggactttcaaaaattggagaagcaaatgagaaaatcactgaa
agaatcgaaaaatatgatttaaaaaataagggatacaatttcaaatcataccctgttgaa
ttttgggacttattcggtgaaaaaggaatacccataagagtcacaatatcacaaatggga
ccaaatttactatccaaaatactaaacctaacagaagctcaagaaggagtattaaacata
gtattcaaagtagcagatgaagaatcattattactgattgatatcaaagatttaaaaata
atgataaatcacgtaacagaaaataaggataagtatgaatcacaatatggtagtatatca
acaagaagtgcaaatacaataataagatcattattaaccctagaagaacaaggaggaaat
aacttctttggagaaccatcattagaacttgaagactttattcaatgtgatgatgaacaa
aaaggaataataaatgtattggatgcagttaaactatcattagctcctgatttatattca
acatttttattatggatgctcactcaattatatgaaactttaccagaagtaggtgaccta
gaaaaacctaaatttgtattcttctttgatgaagcacacttattatttgatgggatgagt
ccagtattccagaagaaaatagaacaaattgtaagattaattcgttcaaaaggagtggga
ttatatttcatatctcaaagtcctgcagacatacctgatgaaatactttcacagttaggt
aacaggatacaacatgcattaagagcatacactcctaaagatcagaaagcagttaaagtt
gctgcagaatcattcagaccaaatccggcgttcaatacgcaggatgttatatcaagttta
ggtataggtgaagcattagtttccttgctggatgaggaaggagttccgggtatcgttgaa
aaagtggatataattccaccacaaagttataatggtgcaatagatgattcatatagacag
gaactaattaatatttcatgtaataaggagaagtatgtgcaagctatagatagagaatca
gcatatgaattattatcccagaaaaaagaaacagtaccggaacaggtagtacaggaacca
gctgtacaggaaccagtagttcaggaaccagaagttcatgaaatacaacacgaaccagtc
aatcaacaaccagaacaagaagaaaagaaaggattctcactacaagacactatacaacaa
acaataaatgaccttgacttcaatccgaacacaaccacaaaaagaagaaacactggatcc
tcacgcaattcaggcaaatcagaaatagataaaatagtacaatcagcaacaaacactatt
gtaagagaagcaacaagacaaattacaagaggactcttcggacaactaaaatttaaataa
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