Methylomarinovum tepidoasis: MIN45_P0768
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Entry
MIN45_P0768 CDS
T09124
Name
(GenBank) tRNA-splicing ligase RtcB
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
meiy
Methylomarinovum tepidoasis
Brite
KEGG Orthology (KO) [BR:
meiy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
meiy03016
]
MIN45_P0768
Enzymes [BR:
meiy01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
MIN45_P0768
Transfer RNA biogenesis [BR:
meiy03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
MIN45_P0768
Prokaryotic type
tRNA splicing ligases
MIN45_P0768
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
BCX88399
UniProt:
A0AAU9C5G0
LinkDB
All DBs
Position
806369..807799
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AA seq
476 aa
AA seq
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MDISKLERIDETCWRIPATGKMRVPVLIYADEALIRDMDDKVAEQAGNVASLPGIVGACY
VMPDAHWGYGFPIGGVAAFDPDEGGVISAGGVGFDISCGVRTLTTGLKREELEPLKKSLA
EALFIHIPAGVGSKGSISLNDAEMNAMLKGGAAWAVERGYGREADLERIEEHGCMAGADP
AQVSKKARERQRREMGTLGSGNHYLEVQVVEQIFNPDVARVFGLEAEEVVVTIHCGSRGL
GHQIGSEYLKLMQKAAKEAGIELPDRELACAPIRSPVGQRYLGAMRAGINCALANRQIIT
HLVRQVFAEFFPDHDLKLIYDVSHNTCKEEEHEVGGRRRRVFVHRKGATRAFGPGHPALP
EVFRPVGQPVIIGGSMGTGSYILVGTTESERHSLSSACHGAGRCLSRRQATKTWKGQQVI
AELERQGIIVRSPSMRGVAEEAPQAYKPVDAVVRAADKAGLARLVARLRPLVCIKG
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atggacatcagcaagctcgagcgtatcgacgaaacctgctggcgcattccggccaccggc
aagatgcgggtgccggtgctgatctatgccgatgaggcgctgatccgcgacatggacgac
aaggtggccgagcaggccggcaacgtcgcttccctgcccggcatcgtcggggcctgttac
gtgatgcccgacgcccactggggctacggcttccccatcggcggggtggcggctttcgat
cccgacgaggggggggtgatttccgccggcggagtcggtttcgacatttcctgcggggtg
cgcaccctcaccaccggcctcaagcgcgaagagctggaaccgctgaaaaaatccctggcc
gaggcgctgttcatccacatccccgccggggtcgggagcaagggttcgatctccctgaac
gatgcggaaatgaacgccatgctcaaaggcggagcggcctgggcggtggaacggggttac
ggccgcgaggcggatctggaacggatcgaggaacacggctgcatggctggcgccgacccg
gcccaggtgtcgaaaaaggcccgcgagcgccagcgccgggagatgggcaccctcggctcc
ggcaatcactatctggaagtccaggtggtggagcagatcttcaacccggatgtggccagg
gtcttcggcctggaggcggaggaagtggtggtcaccatccactgtggctcccgcggcctc
ggccaccagatcggcagcgaatacctcaagctgatgcagaaggcggccaaggaggcgggg
atcgagcttccggaccgggagctggcctgcgccccgatccgctccccggtggggcagcgt
tatctgggcgccatgcgcgccggaatcaactgcgcactggccaaccgccagatcatcacc
cacctggtgcgccaggtgttcgccgaattcttccccgaccacgatctcaagctcatctac
gacgtctcccacaacacctgcaaggaagaggaacacgaggtcggcggcaggcggcggcgg
gtcttcgtccaccgcaagggagcgacgcgggccttcggccccggccatccggccctgccg
gaagtgttcaggccggtggggcagccggtcatcatcggcggctccatgggaaccggctcc
tacatcctggtgggcaccaccgagagcgaacgccactccctgtcctcggcctgccacggc
gccgggcgctgcctgagccggcgtcaggccaccaaaacctggaaagggcagcaggtcatc
gcggagctggagcgccagggcatcatcgtccgcagtccgtcgatgcgcggggtcgccgag
gaggcaccgcaagcttacaagccggtggacgccgtggtgagagccgcggataaggcggga
ctggccaggctggtggcgcggctgcggcccctggtctgcatcaagggctag
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