Methylomarinovum tepidoasis: MIN45_P1363
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Entry
MIN45_P1363 CDS
T09124
Name
(GenBank) ribonuclease E
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
meiy
Methylomarinovum tepidoasis
Pathway
meiy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
meiy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MIN45_P1363
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
meiy03019
]
MIN45_P1363
03009 Ribosome biogenesis [BR:
meiy03009
]
MIN45_P1363
Enzymes [BR:
meiy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
MIN45_P1363
Messenger RNA biogenesis [BR:
meiy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MIN45_P1363
Ribosome biogenesis [BR:
meiy03009
]
Prokaryotic type
rRNA processing factors
MIN45_P1363
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
BCX88993
UniProt:
A0AAU9BZH2
LinkDB
All DBs
Position
complement(1397256..1399361)
Genome browser
AA seq
701 aa
AA seq
DB search
MKRMLINATQPEELRVALVEGQKLYDFDIEVPSREQKKSNIYKGIITRIEPSLEAAFVNY
GAERHGFLPFKEIAPTYFSQPLGPQQSRSDIKDLIREGQEVVVQIEKEERGTKGAALTTY
IALAGSYLVLMPNNPRAGGISRRIEGEARGDLKEILASLDIPEGMGLIVRTAAGGKSAEE
LQWDLNYLLQLWEAIERSAAQRKAPFLIFQESNVIIRALRDHLRADIDEILIDNPATYRM
VRNFLQQVMPHFINKAKLYEDSVPLFSRFQIESQIELAYRREVPLPSGGAIVIDHTEALT
TIDINSARATKGGDIEETAFNTNLEAAEEIARQLRLRDLGGLFVIDFIDMTAMRHQRAVE
TKLREAVKSDRARIQIGRISRFGLLEMSRQRLRPSLGESSLVPCPRCQGQGTIRSTESLA
LSILRIIEEEALKPQTGKIVVQLPVEPATYLLNEKREVLGQIEKRHQVGIVIIPARHLET
PAYEIQRIKASEGEEEAVSYERIEEEERELPEYATAEGRKVEEPAVKDFLPSTPAPIRSK
TSSTELIKRFWQKLVGGARTAEPQDRPDESQATETTETQPPRPRRPRRRRGTANRSAAPT
TPTPVETTTAENPPAEEEPTPAPSRRRSSRRGGRRRRGRRAGGNPAVPSRPDNAETTAEN
TPAPETDKATLTPPPATNILPAPRTTETPEKPPTDRNDEPD
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaatgctcatcaacgccacgcagccggaagagctgcgggtcgccctggtggaa
gggcagaaactttacgactttgacattgaggttccctcccgagaacagaaaaagtccaac
atctacaagggcatcatcacccgcatcgaacccagcctggaagccgccttcgtcaactat
ggtgccgagcgccacggctttctgccgttcaaggagatcgccccgacctatttctctcag
ccccttggaccacagcagagccgctccgacatcaaggacctgatccgggagggccaggag
gtcgtggtccagatcgagaaggaagagcgcggcaccaaaggtgcggctctgaccacctac
atcgccctggccggcagctatctggtgctgatgcccaacaatccccgtgccggcggcatc
tcccgccgcatcgagggcgaggcccggggcgatctgaaggaaattctcgcttccctcgac
attccggaaggtatggggctgatcgtccgtaccgccgccggtggcaaaagcgccgaggaa
ctgcagtgggatctcaactacctgctccagttgtgggaggccatcgaacgctccgccgcc
cagcgcaaagccccgtttctgatcttccaggaaagcaacgtcatcatccgcgccctgcgc
gaccacctgcgcgccgacatcgatgagatcctcatcgacaacccggccacctaccgcatg
gtgcgcaacttcctccagcaggtgatgccgcatttcattaacaaggccaagctgtacgaa
gattccgttcccctgttcagccgtttccagatcgaaagtcagatcgagctggcctaccgg
cgcgaggtgccattgccttccggcggagccatcgtcatcgaccacaccgaggccctgacc
accatcgacatcaactcggcccgggccaccaaaggcggcgacatcgaagaaaccgccttc
aacaccaatctggaggcggccgaggaaatcgcccgccaactgcggttgcgcgacctgggg
gggttgttcgtcatcgacttcatcgacatgaccgccatgcgccaccagcgggcggtggaa
accaaactgcgcgaggcggtcaaaagcgaccgggcccggatccagatcggccgcatctcc
cgcttcggtctgctggaaatgtcccgccagcgcttgcgtccttccctgggggaatccagc
ctggtgccctgtccccgttgccagggacagggcaccatccgcagcaccgaatccctggcg
ctgtcgatcctgcgcatcatcgaggaagaagcgctcaagccccagaccggcaagatcgtg
gtgcaactacccgtcgagccggccacctacctgctcaacgagaaacgcgaggtgctcggg
cagatcgaaaaacgccaccaggtcggcatcgtcatcatcccggcgcgccatctggagacc
cctgcgtacgaaatccagcgcatcaaggccagcgagggagaagaggaagccgtcagttac
gaacgcatcgaggaggaagaacgcgaattgccggaatacgccaccgccgaaggccgcaag
gtggaagaaccggcagtcaaggatttcctgccctcgacgccggcaccgatccgcagcaag
acctcctccaccgagctcatcaaacgcttctggcagaagctggtcggcggcgcccgcacc
gcagaaccgcaggaccgccccgacgaatcccaggctaccgaaaccacggaaacccagccg
ccgaggccgcgacgcccgcgacgacgtcgcggcaccgcgaaccgcagcgccgcaccgacg
accccgacgccggtagaaaccacgacagcggaaaatccgcctgcggaagaagaacccacc
ccggcgccctcacgccgccgcagcagccgccgcggtggccggcggcggcggggacgccgc
gccggtggcaaccctgccgttccatcccggccggacaacgctgaaacgacggcggaaaac
acacctgcgcctgagacagacaaggctacgctcacccccccaccggccaccaacattctg
ccagcgcccagaaccacggaaacgccggaaaaaccgccaacggatcgaaacgacgaaccg
gactga
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