Methylophaga nitratireducenticrescens: Q7A_11
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Entry
Q7A_11 CDS
T02055
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
mej
Methylophaga nitratireducenticrescens
Pathway
mej03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mej00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Q7A_11
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mej03400
]
Q7A_11
Enzymes [BR:
mej01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Q7A_11
DNA repair and recombination proteins [BR:
mej03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Q7A_11
RecFOR pathway proteins
Q7A_11
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_3
Mg_chelatase
TIP49
AAA_22
nSTAND3
Rad17
AAA_16
AAA_14
AAA_18
NTPase_1
DUF4129
RNA_helicase
ABC_tran
Bac_DnaA
AAA_17
AAA_33
AAA_28
TsaE
NB-ARC
NACHT
AAA_24
Resolvase
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AFI82872
UniProt:
I1XEQ3
LinkDB
All DBs
Position
complement(6986..7999)
Genome browser
AA seq
337 aa
AA seq
DB search
MDERFITPQTLNDDDRVDRAIRPIRLEDYIGQPVVREQMELFVAAARQRKEALDHTLIFG
PPGLGKTTLAHIIANEMGVNLRQTSGPVLERPGDLAALLTNLEPNDVLFVDEIHRLSPVV
EEVLYPAMEDYQIDIMIGEGPAARSIKLDLEPFTLVGATTRAGSLTSPLRDRFGIVQRLE
FYNVADLSTIVQRSARILGLTLDVNGADEIAHRSRGTPRIANRLLRRVRDYAEVRFDGIV
TAEIARQALDLLDVDKFGFDMLDRKLLLAIIEKFSGGPVGLDNIAAAIGEERGTIEDVIE
PFLIQEGFIMRTPRGRIATKRAFLHLGLTPDLDLTGD
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atggatgaacgttttattactccgcaaacgctgaatgatgatgaccgggtggatcgggct
atacgacccattaggttagaggattatatcgggcagccggtggtgcgtgagcagatggag
ttatttgttgcagcggcccggcaacgtaaagaagcattggaccatactctgatattcggt
cctccgggtctgggtaaaaccacattggcccatattatcgccaatgaaatgggcgttaat
ttaagacaaacttcggggccagttttagagcgtcctggtgatttggcagcattgctgacg
aatctcgagccgaatgatgtattgtttgtcgatgaaattcatcggttaagcccggtggtt
gaagaagtgttgtatccggcgatggaagattaccagatcgatatcatgatcggtgaagga
ccggcagctcgttcgattaagctggatcttgagccatttaccctggtcggagcaacaacc
cgcgctggttcactgacctcgcctttgcgagaccggtttggcattgtgcagcgattagaa
ttttacaatgttgctgatttaagtacgattgtgcagcgtagcgcacgtattctaggctta
acgctggacgttaatggtgcagatgaaattgctcaccgttccagaggcacgccgcggata
gccaaccgtttattacgacgggttcgtgactacgcagaagtgcggtttgatggtattgtc
acggcagaaattgctagacaggcactggatttactggatgttgataagtttggctttgat
atgctggaccgaaaactgttgttggccattattgaaaaattttccggtggcccggtagga
ctggacaatattgctgcagccattggcgaagagcgtggcacgattgaagatgttattgaa
ccctttttgattcaggaaggatttatcatgcggacacctcgtggcagaatcgccaccaaa
cgggcttttttgcatttgggtctgacaccggatttagatctaacaggtgattga
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