Methylophaga nitratireducenticrescens: Q7A_1575
Help
Entry
Q7A_1575 CDS
T02055
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
mej
Methylophaga nitratireducenticrescens
Brite
KEGG Orthology (KO) [BR:
mej00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mej03009
]
Q7A_1575
Enzymes [BR:
mej01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
Q7A_1575
Ribosome biogenesis [BR:
mej03009
]
Prokaryotic type
ribosomal protein modification factors
Q7A_1575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
YajR_YAM
CLP1_P
DUF5666
PrmA
Motif
Other DBs
NCBI-ProteinID:
AFI84399
UniProt:
I1XJ30
LinkDB
All DBs
Position
complement(1589294..1590604)
Genome browser
AA seq
436 aa
AA seq
DB search
MKAPQVGFVSLGCPKALVDSERIITKLRSEGYEISANYDDADLVVVNTCGFIDSAVDESL
ESIGEAIAQNGKVIVTGCLGSRDNTIREKHPQVLEITGAHALEEVVGAVHKHLSQPHDPF
ISLVPPEGIKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPVNQVIAEAKRLADAG
VKEILVISQDTSAYGVDLKYAEYEWQGEKIATRFTTMAKALGELGIWVRMHYVYPYPHVD
DVIPLMAEGKILPYLDIPFQHASPRILKLMKRPASSQNNLERIQAWRAICPEITLRSTFI
VGFPGETEAEFEELLDFLDQAQLDKAGAFKYSPVDGAVANQLADPVPEEIKEERLARFMA
KQAEISADRLQQKVGKRDFVIIDEVVEEGAVGRSRADAPEIDGQVFIDHATHLKVGDIVE
VEFEEADEHDLWARLV
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgaaagctcctcaggtcgggtttgttagtctcggttgcccaaaagcacttgttgatagc
gaacgtatcatcaccaaattacgttcagaaggttatgaaatttccgccaattacgatgat
gctgatttagtggtggtcaatacctgtggctttattgattctgccgttgatgaatcactg
gaaagtattggtgaagccattgcccagaatggcaaagttattgtgaccggttgtctgggc
agccgtgacaataccatccgtgaaaagcacccgcaggtgctggaaattaccggtgcacat
gcgctggaagaagttgtcggtgctgtccacaaacatctttcacaacctcatgatccgttt
attagtctggtgccgcctgaaggcatcaagctgactccccgtcattacgcctatctgaaa
atttctgaaggctgtaatcatcgctgtaccttctgcattatcccctctatgcgaggcgat
ctggtcagtcgcccggtgaatcaagtaatagctgaagctaagcgtctagctgacgctggc
gtaaaggaaattctggttatttcgcaggataccagtgcttacggtgtcgatttgaaatac
gctgaatatgaatggcagggtgagaaaattgcaacccgctttacaaccatggccaaagct
cttggtgaactcgggatctgggtacgcatgcattatgtttacccctacccgcatgtggat
gatgtaattccactgatggctgaaggcaagatcctgccgtatctggatattccgtttcag
catgccagcccacgtatcctcaaattaatgaaacgtccggcttcatcacaaaataatctg
gaacgcatccaggcctggcgggcaatttgtccggaaatcacgcttcgcagtacctttatc
gtgggattccccggtgaaactgaagctgaatttgaagagttgctggattttcttgatcag
gctcagttggataaagctggtgcttttaaatactcgcctgttgatggtgcagtggcaaac
caattagccgatccagtgcctgaagagattaaagaggaacgtctggcccggtttatggca
aaacaggcggaaatcagtgccgaccggctgcaacaaaaagttgggaaacgcgattttgtg
attattgatgaagtcgttgaagaaggtgccgtcgggcgtagtcgtgctgatgctcctgag
attgatggccaggtttttatcgatcacgccacccatttaaaagtgggagatattgttgag
gtggaatttgaagaggccgatgagcatgacctctgggcaagactggtttag
DBGET
integrated database retrieval system
