Methylophaga nitratireducenticrescens: Q7A_176
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Entry
Q7A_176 CDS
T02055
Name
(GenBank) RNA polymerase subunit sigma
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
mej
Methylophaga nitratireducenticrescens
Pathway
mej02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
mej00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Q7A_176
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mej03021
]
Q7A_176
Transcription machinery [BR:
mej03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Q7A_176
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_ECF
Sigma70_r4
HTH_23
GerE
HTH_28
HTH_24
HTH_40
HTH_7
HTH_36
HTH_Mga
DUF2774
TnsD
HTH_VMAP-M9
HTH_10
HTH_Tnp_ISL3
Xre-like-HTH
HTH_3
YihI
Motif
Other DBs
NCBI-ProteinID:
AFI83035
UniProt:
I1XF66
LinkDB
All DBs
Position
complement(183773..184312)
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AA seq
179 aa
AA seq
DB search
MNAPLSPPPTESLEKLYQNNFSWLQNWLRERLSCSHQAADLAQDTFVRLLSAPDFNGKIE
AIREPRSYLVTVAKRVMIDHFRRRTIEQSYLQALMQQTEQEVISAEQSMIVLETLYRIDT
MLDGLGVKVKTAFLMSQLKGMTYREIAGEMGLSESSVKKYMAKATQHCLLFSLYEQLDA
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcgccattgtctccaccacccacagagagcctggaaaaactctatcaaaataat
ttcagctggttgcagaactggttacgtgagcgtttgagttgttcgcatcaggcggcagat
ttggcgcaggatacgtttgtaagattgctatcagccccggattttaatggcaaaattgag
gctattcgtgagccgcgcagttatctggtaacggtagcaaagcgggtgatgatcgaccat
ttccgtcgtcgcacgatagagcaatcttacctgcaggccttaatgcagcaaacggagcag
gaagtcatctcggcagagcagagcatgattgtgctggaaacgttgtatcgcattgatacc
atgctggatggtttgggtgtgaaagtgaaaaccgcttttctgatgtcccagcttaaaggc
atgacctatcgtgaaattgccggtgaaatgggattgtcagaaagctcggttaaaaaatat
atggccaaagccacacaacattgcctgttattttcattatatgagcagcttgatgcatga
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integrated database retrieval system
