Methylophaga nitratireducenticrescens: Q7A_2480
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Entry
Q7A_2480 CDS
T02055
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
mej
Methylophaga nitratireducenticrescens
Pathway
mej03030
DNA replication
mej03410
Base excision repair
mej03420
Nucleotide excision repair
mej03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mej00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Q7A_2480
03410 Base excision repair
Q7A_2480
03420 Nucleotide excision repair
Q7A_2480
03440 Homologous recombination
Q7A_2480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mej03032
]
Q7A_2480
03400 DNA repair and recombination proteins [BR:
mej03400
]
Q7A_2480
Enzymes [BR:
mej01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Q7A_2480
DNA replication proteins [BR:
mej03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Q7A_2480
DNA repair and recombination proteins [BR:
mej03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Q7A_2480
NER (nucleotide excision repair)
GGR (global genome repair) factors
Q7A_2480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AFI85280
UniProt:
I1XLL1
LinkDB
All DBs
Position
3071650..3074364
Genome browser
AA seq
904 aa
AA seq
DB search
MTQTAPLILVDGSSYLYRAYHAMPPLTNSDGEATGTIYGVINMLRKLIRDYQPEHMAVVF
DAKGKTFRNDLYAEYKATRPPMPDDLREQIEPIHEIVKAMGLPLLCIDNVEADDVIGTLA
KQATAAGIETVISTGDKDMAQLVSKHVTLVNTMNNTKTDIAAVQEKFGLTPQQIVDYLAL
MGDKVDNIPGVDSVGPKTATKLLQQYGSLQGVIEHADEVKGKLGEKLRAAVDALPLSYQL
ATIKMDVELDFTPETLDMQVADNQKLAELYRRYEFKSWLQELDSAPAAGPSTKTDEPATS
NETYYETILTQQQLDSWMDKLKKAELFAFDTETTSLNYLQARIVGMSFAIKAGEAAYLPL
AHDYPGAPDQLDFDATLALMKPLLEDPKALKVGQNLKYDRHILLNHGINLQGIAHDTMLQ
SYVLDSTATRHDMDSLAEKYLGRSTIHFEDIAGKGKKQLTFNEIGLEEASPYACEDADIT
LQLHHVLWPKVQAIPSLETVYRELEMPLLPVLNTLERNGVHIDIFMLQQQSDQLALDIDR
LEKEAHASAGTKFNLGSPKQLQEILYDQQQLPVRKKTPKGQPSTAENVLQELADDGYELP
QIIMNYRSLSKLKSTYTDKLPQQVNQQTGRVHTSYHQAVTATGRLSSSDPNLQNIPIRTE
TGRKIREAFVAGKGAKILAADYSQIELRIMAHLSGDKSLLTAFAEGEDIHRHTASEIFGV
EAEQVNGDQRRSAKAINFGLIYGMSAHGLSKQLGIERHQAAKYMETYFERYPGVRNYMDN
TREQAKKDGYVETIFGRRLYLPEINSSNGLRRQYAERTAINAPMQGSAADIIKRAMISIH
DWLLEADTGIRMIMQVHDELVFEVPEDQLDLAKTEIEQFMIQAADLEVPLEVGIGVGDNW
EQAH
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atgactcaaactgcaccacttattcttgttgatggctcttcctatctgtatcgcgcttat
cacgcgatgcctccgttaacgaatagtgacggcgaagccaccggtaccatttatggcgtc
atcaatatgctgcgtaaattaatccgtgattatcaacccgaacatatggcagtggtattt
gatgccaagggcaaaaccttccgtaatgatctctacgcagagtataaagccacccgtccg
ccaatgccggacgatttacgtgaacaaattgaaccgatccatgaaattgttaaagccatg
ggcttgccgctgctctgcattgataacgttgaagctgatgatgtgatcggcacgctggca
aaacaggccactgcagccggaattgaaaccgtgatttctacaggggacaaagatatggcg
cagctggttagcaagcatgtgacactggtcaacaccatgaataacactaaaaccgatatc
gccgccgtgcaagaaaaatttggcctgaccccacagcaaatcgtcgactatctggcgttg
atgggcgacaaggtggataacatccccggcgttgacagtgttggcccaaaaaccgcaacc
aaactgctgcaacaatatggcagtttgcagggtgttatcgaacatgctgatgaagttaaa
ggcaaactgggtgagaaattaagagcagccgttgatgctttgccactctcctatcagttg
gccaccatcaagatggatgtcgagctggatttcacaccggaaacgctggatatgcaggta
gcggataaccagaaactggcagagctgtatcgacgttatgaattcaaaagctggttacaa
gaattagactctgcacctgctgctgggccttcgacaaaaacggatgaacctgccaccagc
aatgaaacatattatgaaaccattctgactcagcagcagctggatagctggatggataaa
ctcaaaaaagctgaactgtttgcctttgataccgaaaccaccagcctcaattatttgcag
gcacgtatcgtcggtatgtcatttgccattaaagccggtgaagccgcttatctgccgctg
gcgcatgattatccgggcgccccggatcagctggattttgatgccacgctggctctgatg
aaaccattactggaagatcccaaggcactgaaagtcggtcagaacctcaaatatgaccgg
catatcctgctcaatcatggcattaatttgcagggtattgcccatgacaccatgttgcag
tcctatgtgttggatagcaccgcgacccgccacgatatggactcgctggccgaaaaatat
ctgggccgcagcaccattcattttgaagatattgccggtaaaggcaaaaaacaactgact
ttcaatgaaatcggtttagaagaagcctctccatatgcctgtgaggatgccgatatcacc
ttgcaactgcatcacgttttatggcccaaggttcaggcgattccatcattggaaaccgtt
tatcgtgaactggaaatgccgttgttgccggtgctcaacacactggaacgtaatggcgtg
catattgatatctttatgctgcaacagcaaagcgaccaactggcattggatattgatcgg
ctggaaaaagaggcccatgcctctgccgggaccaaattcaatctgggttcaccaaagcaa
ttacaggaaattctttacgaccagcagcaattgccagttcgtaaaaaaacgcctaaaggc
caaccttcgaccgctgaaaatgtgctgcaggaactggcagatgatggctatgaacttcca
caaatcattatgaattaccgcagtttgagtaagctgaaatccacttacactgacaaactg
ccacagcaggtcaatcaacagaccggccgtgttcatacctcttatcatcaggcggtcaca
gctaccggacgcttatcttcttcggatccaaatctgcagaatattccgatccgtactgag
acgggtcgtaaaatccgtgaagcctttgttgccggaaaaggtgccaagatcctggcagcc
gattattcacaaattgaattacgcatcatggcgcatttatcaggcgataaaagcctgctg
accgcatttgccgagggtgaagacatacatcgccacactgcctccgaaatttttggcgtg
gaagcggaacaagttaacggtgatcaacgtcgcagtgccaaagccatcaactttggttta
atttacggtatgtccgcccacggactatccaaacaactgggcatcgaacgtcatcaggct
gccaaatacatggaaacctatttcgaacgctatcccggtgtcagaaattacatggacaat
actcgtgaacaggccaaaaaagatggatatgtcgaaaccattttcgggcgacggttatat
ttgccggaaatcaactccagcaacggcctgcgtcgtcaatacgccgaacgaaccgcgatt
aacgccccgatgcagggcagtgccgcagatattatcaaacgcgcaatgatttcgatccat
gactggttgcttgaagctgataccggtattcgcatgattatgcaggtgcacgatgaatta
gtatttgaagtgcccgaagatcagcttgatttagctaaaaccgaaattgagcaatttatg
attcaagccgctgatctcgaagtgccattagaagttggtattggggttggggataattgg
gaacaagcgcactag
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