KEGG   Methylophaga nitratireducenticrescens: Q7A_2612
Entry
Q7A_2612          CDS       T02055                                 
Name
(GenBank) CRISPR-associated endonuclease Cas3''
  KO
K07012  CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
Organism
mej  Methylophaga nitratireducenticrescens
Brite
KEGG Orthology (KO) [BR:mej00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:mej02048]
    Q7A_2612
Enzymes [BR:mej01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Q7A_2612
Prokaryotic defense system [BR:mej02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Type I signiture cas proteins
    Q7A_2612
SSDB
Motif
Pfam: Cas3_I-F_Cas2 Cas3-like_C_2 ResIII Cas3_HD DEAD HD PhoH HDOD IstB_IS21 TrkA_N ATPase_2 AAA_22 Helicase_C UPF0122 AAA_11
Other DBs
NCBI-ProteinID: AFI85402
UniProt: I1XLY3
LinkDB
Position
complement(2422176..2425151)
AA seq 991 aa
MMVTFVSQCEKKALARTRRVLDAFADRIGDNTWQTVITQEGLNAVRKLLRKTASKNTAVS
CHWIRSRSRSELVWVVGRTHVFNHRGVVPVNFTSKEVIMDRLPIETGDLLANTRAQALSK
HLFAAGFVAHQILDALQINNQNLKQAVFIAGIFHDIGKIDPEFQNWVNKKLGKIPDDFVP
DDGVHIDSPAKFSFEKHPRHHELSWIFAESLMDGCSLNDGQRKQIAHAIYWHHTKPFRKE
DKFTNPEAIYAVFKKSLAKDKFEDVFNKVLAVIKDVGYMASKFEVENFLVGLNNSFSLTS
KTCPDYKKYDGWADDIPEFQSNVRENALNNLVRSAVISADRLVSSRSSEDLEEYLAEGSL
AELNNIEITQDKSLLKEGIEQCLYGFISAYPNSQRNEAQSHAAKSLADLKKIAKLNNSAN
IGVLQGPAGCGKTKIALEWALKTDAEKIIWVCPRVQVCLGLLHDLTAEEYLPDGQIEIFT
GEYKKILGNGRSFEDVPDTDESDYFSGDIVITTIDQVVNSIRSHSHVDTFIQFMNAHVVF
DEFHELVNMPAFNLLFAELIEAKKQQGEHANTLLVSATPNYFYLTQFLGIQKEDIITIDS
FNASRYQIDFINYDEKEELSPLIRESQQGKTFVITNTALDAQLGYLQHHGIENSVLLHSK
YTKQDKAYWFDAVFNSFKRNGSQRYEVLRSGPIVQASLNITCDRMLTEITNAENWLQRLG
RLDRFGENEGVNPYITVIPKSLEINGKQTSSCARFLNQMCVWNSTKAWLSFLKERLETQK
TVTINQLYEIYRSFYTDKQAQEWLKQDFLLSLKKSVELINKKIIDPISVPPKSKLKQGII
KISANSLRGDNRFVQMAVCEVLEDQQLFFSENYASSETFNPNQPPSALTESIETMRGYGN
DDANLVQFMQKKHHNIKSDEGYKKARNEWELIKEARSPESPIYLSYTPKDLSLVNSNPHP
QAVYYVISNRQPVGAMSIAKLKNKLKSQTAE
NT seq 2976 nt   +upstreamnt  +downstreamnt
atgatggtgacatttgtctctcaatgtgaaaagaaggcgctagctcgaaccaggcgagta
ctggacgcctttgctgatcggattggtgataacacctggcaaacagtgattacacaagaa
ggactcaatgccgtcagaaaactcctgagaaaaacggcaagtaaaaacacagcagtcagt
tgtcattggatacgtagtcggtcaaggtctgagttggtttgggtggtgggtcgtacccat
gtatttaaccatcgaggtgtagtgcctgttaactttacatcgaaggaagtcattatggat
agattacctatagaaactggtgatttgcttgctaatacccgtgctcaagcattaagcaag
catctttttgctgccggttttgttgctcatcaaatattggatgctttacagatcaataac
caaaacctcaagcaagcggtttttatcgcgggaattttccatgacattggaaaaatagat
ccagagtttcaaaactgggtgaataaaaagctcgggaaaattccagatgacttcgttccc
gatgatggtgttcacattgattctcctgcgaaattttcttttgagaaacatccaagacat
catgagctgtcatggatttttgctgagtctttgatggacggttgttccttaaatgatgga
cagcgcaaacagattgcacatgccatctattggcatcacaccaaaccatttagaaaggag
gacaaatttactaatccagaagccatctatgcagtgtttaaaaagtcattggcaaaagac
aagtttgaggatgtattcaataaagtcctagccgttattaaagatgttggctatatggct
tcaaagtttgaagtagaaaatttccttgttggcttaaataattcatttagcctgacgtca
aaaacgtgtcctgattacaaaaaatatgatggatgggcggatgatatacccgaatttcag
agtaatgtgcgtgaaaacgcattgaataatcttgtcagatcagcagtaattagtgctgat
cgattggtctcaagtcgttcttctgaagacttggaagaatatcttgctgaaggttctttg
gccgagcttaacaatatagaaattacacaagataaatcattactaaaagaaggaattgaa
cagtgtttatatggctttataagtgcctatccaaatagtcaacgtaacgaagctcaaagt
catgcagcaaaatctctggctgatttaaagaaaatagctaaactcaataactctgcaaat
attggggtgcttcaagggcctgccgggtgtggtaaaacaaaaatagcccttgaatgggca
ttgaaaacagatgctgaaaaaattatatgggtatgcccacgagtacaggtttgccttggc
ttattgcatgacttgacggcagaagaatatttacctgatggacaaattgagatatttaca
ggggaatacaaaaaaatcttaggtaatggccgtagctttgaagatgttcccgataccgat
gagtcggattacttcagtggggatattgtgataaccacaattgaccaagtggttaactca
attcgatctcacagccatgtagacacatttatccaatttatgaatgcacatgtagtgttt
gacgagtttcatgaattggtcaatatgcctgcttttaacctattgtttgcagaacttatt
gaggccaaaaaacagcagggtgaacacgccaatacgttgttagtgtctgcaaccccaaat
tatttctatctgacccaatttttaggtattcaaaaagaagatatcatcacaatcgatagc
tttaacgcctcaagatatcagattgactttataaactatgatgaaaaagaagaactcagc
cctttaatcagggaatcccagcaggggaagactttcgttatcacaaatactgcattggat
gcacaattgggctatttgcagcatcatggaattgaaaatagtgttttgctgcattctaaa
tatacaaaacaagacaaggcctattggttcgatgcggtgttcaatagcttcaaacgtaac
gggagtcagcgatacgaagttctacgaagtgggccaatagttcaggcatctctgaatatc
acctgtgaccgaatgttgactgaaatcaccaatgctgaaaactggctccagcgcttaggg
cgtctcgaccgttttggtgagaatgaaggggtcaatccatatattactgtgataccaaag
agtctagaaataaatggtaaacagactagcagttgtgcaagatttttgaatcagatgtgt
gtatggaatagtaccaaagcttggttgagttttttgaaagaacgattagagactcagaaa
acagtcactattaatcagctttacgagatttatcgatctttttataccgacaagcaggca
caagaatggcttaagcaggactttctgctttcattgaaaaaaagtgtcgaacttattaac
aagaaaattattgacccgatttcggtgccgccaaagtctaaattaaaacaaggcatcatc
aaaatatcagctaactcacttcgtggcgataatcgttttgtgcaaatggcagtttgtgag
gtgttggaagatcagcaactatttttttctgaaaattatgcttccagtgaaacctttaat
ccaaatcaaccaccatcggcactgacagaatcaatcgaaacaatgcgtggatatggcaat
gatgatgcgaatctagttcagttcatgcagaagaaacatcacaatatcaaatctgatgag
ggatacaaaaaagcacgaaacgaatgggagttgattaaagaggctcgttcaccagaaagt
ccaatttaccttagttatacaccgaaagacctcagtttagtgaatagtaatcctcaccct
caagccgtgtattacgtcataagcaatagacaacccgttggtgcgatgtcgattgcaaaa
cttaaaaacaagcttaaatcacaaacagctgaatag

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