Methylophaga nitratireducenticrescens: Q7A_2922
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Entry
Q7A_2922 CDS
T02055
Name
(GenBank) DNA-dependent helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mej
Methylophaga nitratireducenticrescens
Pathway
mej03420
Nucleotide excision repair
mej03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mej00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Q7A_2922
03430 Mismatch repair
Q7A_2922
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mej03400
]
Q7A_2922
Enzymes [BR:
mej01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Q7A_2922
DNA repair and recombination proteins [BR:
mej03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Q7A_2922
MMR (mismatch excision repair)
Other MMR factors
Q7A_2922
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_11
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
AFI85699
UniProt:
I1XMT0
LinkDB
All DBs
Position
2727859..2730021
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AA seq
720 aa
AA seq
DB search
MDVSELLDDLNKPQREAVAAPLGHTRILAGAGSGKTRVLVHRIAWLIQAEALSPANILAV
TFTNKAAAEMRGRIEQMLGYPIGGMWVGTFHGLAHRLLRSHWQEAGLPQGFQILDSDDQL
RMIKRIIRGMSLDEAQWPPKQAQWYINGQKDEGLRAAHLQAGEDPYSQNMLAIYLAYEQA
CERAGVVDFGELLLRSHELWLKRPDILAHYQQRFSQILVDEFQDTNTIQYAWIRVLAGQT
GHLFIVGDDDQSIYGWRGAKIENIQKFHKDYPDASTVRLEQNYRSTGNILAVANAVIANN
SERLGKELWTEDADGEPIQLYNAYNERDEAAYLVQEVRNWMNQGGQRSDVAVLYRSNAQS
RVIEEALMQSAVPYRVYGGLRFFERAEIKDVLSYLRLISNRRDDAAFERVVNTPTRGIGA
ATLTQLRQHARETNQTMWQSAVDFLQQKILPARAANALSAFLTLIDSLTPEDDTMSLHEL
TALVIDESGLRTHFAKDKTEKGQGRIENMDELINASREFMRADDEEEMPLLDAFLAHAAL
EAGENQGDQWQDCVQLMTLHSAKGLEFPIVFMVGMEEGLFPGQKSADDPLRLAEERRLCY
VGMTRARKTLYLLYTESRYLYGQEMHPRPSRFLSEIPAERVHQVRSPQNMAASGLTALAS
RSQSADDNGFRTGQQVMHQKFGQGVIIDTEGNGSHARVHVNFKQAGSKWLVLAYAKLETL
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggatgtatctgaactacttgatgatctgaacaaaccacaacgtgaagctgttgccgca
ccgctggggcatacgcgcattcttgctggtgcaggaagtggtaaaacacgtgttctggta
catcgaattgcctggctgattcaggcagaagccttatcaccggcaaacatccttgctgtt
actttcaccaataaagctgccgcagaaatgcgtgggcgtattgaacagatgctcggctat
cctattggcggtatgtgggttggtaccttccatggtctggcgcaccgcttactgcgttcc
cattggcaagaggctgggttgccgcaaggtttccagatcctcgacagcgatgatcaatta
cgcatgatcaaacgcattatccgtggcatgtcactggacgaagctcagtggccccccaag
caggctcagtggtatatcaacggccagaaagatgaaggtcttcgtgccgcacatctgcaa
gccggggaagatccctattcacaaaacatgctggcaatttatctggcttatgagcaagcc
tgtgaacgtgccggagtggtcgattttggcgagttactgctgcgcagccatgaattgtgg
ctgaaacgccctgatattctggcgcattatcaacaacgtttttcgcagatcttggtcgat
gagtttcaggataccaataccattcagtatgcctggataagagtgctggccggtcaaact
ggacatctgtttattgtcggtgacgatgatcagtcaatttacggctggcgcggcgccaaa
atcgagaatatccagaaatttcataaagattatcccgatgctagcaccgtaaggttggag
caaaactatcgttctaccggcaatattttggccgtcgccaatgcggttatcgcgaataac
agtgaacgtcttggcaaggagctgtggaccgaagatgccgatggtgagcctatccagctt
tataacgcttataacgaacgcgatgaagccgcctacctggtgcaggaagtacgtaactgg
atgaatcagggtggtcagcgcagtgatgttgccgtgctgtatcgttccaacgctcagtca
cgggtcattgaagaagccttgatgcagtcggctgtgccctatcgggtttatggcggtcta
cggttctttgaacgtgctgaaatcaaggatgtattgtcatatctcaggctaatcagtaat
cgacgtgatgatgcggcatttgaacgggtagtgaacacgcctaccagaggtattggagca
gcaacattaacccagttgcgtcaacatgcccgcgaaaccaaccagaccatgtggcaatct
gccgtggattttctgcagcaaaaaatattacctgcacgcgcagccaatgctttgtcggct
tttctgacattgatcgattcattaacaccagaagacgacactatgtcgttacatgagctc
acggcattagtgattgatgaaagtgggctacgcacgcacttcgccaaggataaaaccgaa
aaaggtcagggtcgtattgaaaacatggacgaactgattaatgccagccgggaatttatg
cgcgctgacgatgaagaagagatgccgttactggatgcttttcttgcgcacgccgctttg
gaagctggcgaaaatcagggtgatcaatggcaggattgcgtgcagttaatgaccctgcat
tccgccaaaggtctggaatttcccatcgtctttatggtggggatggaagaaggccttttc
cccggccagaaatcagcggatgacccactgcggctggctgaagagcgccgtctttgttat
gtcggcatgacccgggcccgtaaaacactctatctgttgtataccgaatcacgctatttg
tatgggcaggaaatgcatccccgcccttcgcgctttttaagtgaaatccctgctgaacga
gttcatcaggtacgttctccacagaatatggctgcgtcgggtctgacggcacttgccagt
cgatcacaatcagctgatgataacggtttcagaaccgggcaacaggtgatgcatcagaaa
tttgggcaaggggtgattattgacactgaaggcaatggcagtcacgctcgggtccatgtg
aatttcaaacaagccggaagtaaatggctggtcttggcctatgccaaacttgaaaccttg
taa
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