Methylophaga nitratireducenticrescens: Q7A_2927
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Entry
Q7A_2927 CDS
T02055
Name
(GenBank) DEAD/DEAH box helicase
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
mej
Methylophaga nitratireducenticrescens
Brite
KEGG Orthology (KO) [BR:
mej00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mej03009
]
Q7A_2927
Enzymes [BR:
mej01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Q7A_2927
Ribosome biogenesis [BR:
mej03009
]
Prokaryotic type
rRNA helicases
Q7A_2927
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
UTP25_NTPase-like
Cas3-like_C_2
VEK-30
AAA_30
AAA_11
SNF2-rel_dom
UvrD-helicase
SLFN-g3_helicase
P-loop_SecA
AAA_25
Flavi_DEAD
CMS1
Motif
Other DBs
NCBI-ProteinID:
AFI85704
UniProt:
I1XMT5
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All DBs
Position
2732879..2734099
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AA seq
406 aa
AA seq
DB search
MTFDDLFLDDELIAAVRDSGFEKPTEVQQLAIPALLAGQDVLACAATGTGKTAAFILPIL
QRLNDERHKHDQARILILAPTRELAFQIQHVFHQLGKAFKPTIAMLTGGASPWAQVQHAT
AQCDIIIATPGRLLSLVNDESVDLSAVELVIIDEADRMLDMGQGPDVLMALAAIKSKFQA
GLFSATLAGSGVRIFADELLTDPQEIHINAANQLAENVTQQVYLADNREHKQALLLAFIN
APACQRALVFCNKKIRAEEVCDWLQSQNISAQLLHGDFDQSVRRERIRKFRAGQIKVTVA
TDVAARGLDVADITHVINYDLPFRGDNYIHRIGRTGRADKHGTAINLVEPHDIKNLERIE
YHLGHGLPIRKLKGLAPKAKANKARSKSKEDKPRYIPKKDRAVKDD
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgacatttgacgatttattccttgatgatgaattgattgctgctgtgcgcgacagtggt
tttgaaaaaccgactgaggtccagcaattggcgatcccagcattattggccggtcaggac
gtattggcctgtgccgctaccggtaccgggaaaactgcggcctttatcctaccaatcctg
caacgcctcaatgatgaacgccataaacacgatcaggctcgtattctgatcctcgctccc
acccgcgaactggcatttcagatccagcatgtgtttcatcaactcggtaaagcctttaaa
ccaaccatcgccatgttgaccggcggtgcctcgccctgggcacaggtccagcatgctact
gctcaatgcgacattattatcgctacgcccggtcgtctgttaagtctggtgaatgatgaa
tcagtcgatttatcagcagttgaactggtcattattgacgaagccgatcgcatgctcgat
atgggacagggaccggatgtgctgatggcgctcgctgcgattaaatccaaattccaggcc
ggactgttctcggcaaccttggcaggcagtggtgtcagaatttttgctgacgaattgctt
accgacccgcaggaaattcatattaatgcggccaatcaactggcagagaatgttactcag
caggtttacctggctgataaccgtgaacataaacaggctttattactggcatttatcaac
gcaccggcctgccaacgcgccttagtattctgtaataaaaaaattcgtgctgaagaagtc
tgcgactggttacagtcacagaatatctctgctcagctgttacatggtgattttgatcaa
tctgtacgccgtgaacggattcgtaaattccgcgccggccaaatcaaggtcacggtagcc
accgatgttgctgcccggggtctggatgtagcggatattactcatgtcataaactacgat
ctgccatttcgcggtgataactatattcatcgtattggccgtaccggtcgggcagataaa
catggcacagcgattaatctggtcgaaccgcatgatataaaaaatctggaacgcattgaa
tatcaccttggccacggcttgcccatccgtaaattgaaggggcttgcgcctaaggccaag
gctaacaaggcacgctctaaaagcaaggaagataagccgcgttatattcccaaaaaagat
cgtgccgttaaagacgattaa
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