Methylophaga nitratireducenticrescens: Q7A_877
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Entry
Q7A_877 CDS
T02055
Name
(GenBank) exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
mej
Methylophaga nitratireducenticrescens
Pathway
mej03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mej00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Q7A_877
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mej03400
]
Q7A_877
Enzymes [BR:
mej01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
Q7A_877
DNA repair and recombination proteins [BR:
mej03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
Q7A_877
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Q7A_877
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Q7A_877
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_X-T_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AFI83719
UniProt:
I1XH50
LinkDB
All DBs
Position
complement(888981..890423)
Genome browser
AA seq
480 aa
AA seq
DB search
MNTLYWHDYETTGTDPRFDRPLQFAGVRTDEDLNIIGEPLMIYCKPAADVLPHPMASLIT
GITPQKALQDGLTEAEFIKVIHQELSKPGTCGVGYNSLRFDDEFTRFALFRNFYDAYARE
WQNGNSRWDIIDMVRLTRALRPEGIEWPNREDGLPSFRLEALTAANGIEHQGAHDALVDV
HATIALAKLIKDRQPKLYDYIYQLRRKQQLAPLLNLHHADPVLHTSRMYPSEYCNTALVM
PIAKEPNNNNGVVVYDLRHDPSALLEQDADTIRQWLFTPTRDLPEGASRPALKTVHINKC
PVIVPAATLDDAAAERLQIDRELSHKHLQLLREAGESLQQKLQTVFSQKSFDEIDDVDAS
LYGGGFFDDGDKNKMTLIREAAPDQLGTLSIPFNDPRLPEMLFRYRARNWPESLNESEAE
QWQQFCRNKLTATVSPGLTFEKFNAALAECRQQEITVDQQQTLDDLQRYVMEQQTSLGMN
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgaatacgctgtactggcacgattatgagactacgggaaccgatccgcgctttgatcgg
ccactgcaatttgccggggtgcgcactgatgaagatctgaatatcatcggtgaaccgttg
atgatttactgcaaaccggcagccgatgttttaccgcatccaatggcgagtctgattact
ggcatcacccctcagaaagcactacaggatggtctgactgaagctgaatttatcaaagta
attcatcaggaattgtctaagccaggcacctgtggtgtgggctataacagtttgcggttt
gatgatgaatttacccgcttcgctctgtttcgtaatttttacgacgcctatgcccgtgaa
tggcaaaacggtaattcgcgctgggacattattgatatggtgcgactcacccgcgctttg
cgtccggaaggcatcgaatggcctaatcgtgaagatggtctgcccagcttccggctcgaa
gcactcactgcggcaaacggcattgaacatcagggcgcgcatgatgcgttagtggatgtg
catgccaccatcgcgctggcaaaactgattaaagatcgtcagccaaaactgtatgactat
atttatcagttacgccgtaaacagcagcttgctccgttactgaacctgcatcatgcggat
ccggtattgcatacctcacgcatgtacccatctgaatattgcaatacggcattggtgatg
cccattgccaaagaacccaataacaacaatggggtagttgtttatgaccttcgccatgat
ccctcggcgttactggagcaggatgccgataccatccgacaatggttatttacacctacc
agggatttgcctgaaggtgcttcccgtccagcattaaaaaccgtgcatatcaataaatgt
ccggtcattgttcctgctgctacgctggatgatgcggctgctgagcggctgcagattgat
cgggaattaagtcacaaacatctgcaacttctgcgtgaggccggagaatcattacagcaa
aaattgcagaccgtgttcagtcaaaaatcgtttgatgaaatagacgatgtcgatgccagt
ttatatggcggcggtttttttgatgacggcgataaaaacaaaatgaccctgattcgtgaa
gcggctcctgatcaattgggcacgttatcgattccttttaacgatccgcgattacctgaa
atgctgtttcgttaccgggcacgtaactggcccgaatcgttaaatgaaagtgaagcggaa
caatggcagcaattctgtcgtaacaaattaaccgcaactgtgtcgcctggacttaccttt
gaaaaatttaacgccgcattagccgagtgtcgtcaacaagagatcaccgtagaccaacag
caaactttggacgacttgcaacgctatgtaatggagcaacaaacctcgttaggaatgaac
tga
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