Methanosarcina sp. Kolksee: MSKOL_0206
Help
Entry
MSKOL_0206 CDS
T03821
Name
(GenBank) TATA-box binding protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
mek
Methanosarcina sp. Kolksee
Pathway
mek03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mek00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
MSKOL_0206
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mek03000
]
MSKOL_0206
03021 Transcription machinery [BR:
mek03021
]
MSKOL_0206
Transcription factors [BR:
mek03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
MSKOL_0206
Transcription machinery [BR:
mek03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
MSKOL_0206
RNA polymerase III system
TFIIIB
MSKOL_0206
RNA polymerase I system
SL1/TIF-1B
MSKOL_0206
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
DUF3378
NMD4_C
Motif
Other DBs
NCBI-ProteinID:
AKB45983
LinkDB
All DBs
Position
complement(229108..229662)
Genome browser
AA seq
184 aa
AA seq
DB search
MEYAITIENVVASTTLAEDFDLLKIEAGLEGAEYNKAKFPGLVYRTENPKAAFLIFTSGK
VVCTGAKTVENAKMAIINLAKILKSIGCEKINSEPEVYIQNIVATADLETNLNLNTIVIA
FGMENVEYEPEVFPGLVYRLESPKVVVLIFSSGKLVITGGKSPEDCEKGLQVIKTEFDNL
GLIY
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atggaatacgcaataactatagagaatgtggtggcatccaccactctggcggaagatttc
gacctgctgaagatagaggccggactggagggagcagaatataacaaagctaagttccct
ggcctggtctacagaactgagaacccaaaggctgcttttctgattttcacctccggaaaa
gtggtatgtaccggagctaagaccgtcgagaacgctaaaatggccataatcaatctggct
aaaatactcaagtccattggctgcgagaaaataaattcagaacctgaggtttatattcaa
aacattgtagcaactgctgatttggaaacgaacctgaacctgaatacaattgtcatagcc
tttggtatggagaacgtagaatacgagccagaggtatttcccgggcttgtttacaggctt
gagtctcccaaggtagtagtgctcatattcagctctggcaaactggtgatcacaggcggc
aaatctccggaggattgcgagaagggcctgcaggtcataaagacagagtttgataactta
gggcttatttattga
DBGET
integrated database retrieval system
