Methanosarcina sp. Kolksee: MSKOL_0229
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Entry
MSKOL_0229 CDS
T03821
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
mek
Methanosarcina sp. Kolksee
Brite
KEGG Orthology (KO) [BR:
mek00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mek03016
]
MSKOL_0229
Enzymes [BR:
mek01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
MSKOL_0229
Transfer RNA biogenesis [BR:
mek03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MSKOL_0229
Prokaryotic type
MSKOL_0229
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
AKB46006
UniProt:
A0A0E3LIH0
LinkDB
All DBs
Position
complement(264109..264918)
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AA seq
269 aa
AA seq
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MRVALKLAYIGTEFHGSQIQPNVETVEGELFKALRNLGIIESPKSANYICAGRTDAGVHA
LGQVFAFDTDKMNLAIPRVINSELPSGIWVWAHAEVPLSFDARRDAISRHYRYVMSGREY
DISKIREASKFLLGTHDFENLSRTNGEKSTVRTIERIDARIDGELIKIDVVGNSFLWNMV
RKIVTALSMIGKGVRDTDWLLQMLNPDIYEEGIEPAPAYGLTLLKVNYNEKIEWIEDSYS
IRRASEQNQKRILRHRVMAEVLEELISHE
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgagagtcgctttaaaacttgcatacataggcaccgagtttcacggctcccagatccag
cccaatgtcgagactgtggagggagaactcttcaaggctcttcggaatctcgggattata
gaaagccccaagtctgcgaattatatctgcgctggcagaaccgatgccggggttcatgcc
cttggacaggttttcgcttttgacacggataaaatgaacctggcaattccaagagtaata
aattccgaacttccctcgggaatctgggtctgggctcacgcggaagtgcccctaagcttt
gatgccagaagagatgcgatttccagacactaccgctatgtaatgagcggaagagagtat
gacatctccaaaatcagggaagcttcaaaatttctgcttgggacgcacgattttgaaaac
ctttcgcgaaccaatggagaaaaaagtacggttcgaaccatagaaaggatcgatgcccga
atagatggagagcttataaaaatcgatgttgttggaaatagtttcctctggaatatggtc
cggaaaatcgtaaccgccctttccatgataggcaaaggggtgcgtgataccgattggctg
ctccagatgctgaatccggatatttatgaagaaggtatcgagcctgctcctgcatatgga
ttgacccttctgaaagttaattataacgagaaaatagaatggattgaagacagttattct
atcaggagagcaagcgagcagaaccagaaacgtatcctcagacacagggttatggcagaa
gtgctggaagaactgatctcccatgagtaa
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