Methanosarcina sp. Kolksee: MSKOL_0258
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Entry
MSKOL_0258 CDS
T03821
Name
(GenBank) Transcriptional regulator, TrmB family
KO
K23356
HTH-type transcriptional regulator, sugar sensing transcriptional regulator
Organism
mek
Methanosarcina sp. Kolksee
Brite
KEGG Orthology (KO) [BR:
mek00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mek03000
]
MSKOL_0258
Transcription factors [BR:
mek03000
]
Prokaryotic type
Helix-turn-helix
Other families
MSKOL_0258
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Ortholog
Paralog
GFIT
Motif
Pfam:
TrmB
TrmB_EBD_N
HTH_IclR
HTH_34
HTH_27
HTH_46
DnaD_N
Rrf2
PadR
GntR
PF0610-like_N
ULD
MarR_2
WHD_RecQ_mid_bact
Motif
Other DBs
NCBI-ProteinID:
AKB46035
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Position
complement(303503..304273)
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AA seq
256 aa
AA seq
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MALQTNPQLIHNLEKLGLTENEAKAYVGLVSLREATAREIHELTNVPRAKIYEILKVLAK
KGYLEVRQGSPTYFRAVDPKKVIGEIKNEFLNCAIETLGQLNELSYELPKTSPVWYIQSD
WGIKNRIREIMAGVREELIIFSSSPELLKEFKQEIKKLEKTCNLTLIVDELDRFKSLPFE
FKETNKEFTNFMNNIVIDGIQYKEEFFMIADGKESIGVHSAGNKREAVIIKLPIVSYMQK
MIYERVLEPGFIKQDR
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atggcattacaaacaaatcctcagttaattcataaccttgaaaaactggggctaaccgaa
aatgaagcaaaagcatatgttgggctcgttagtttgagggaggctacagcccgtgagatt
cacgaacttacaaatgtgccaagagccaaaatatatgaaattctgaaggtacttgcaaaa
aaaggctatctggaagtgagacagggatctccaacgtatttccgagcagttgatcctaag
aaggtaatcggagaaataaaaaacgaattcttaaactgtgcaatagagacacttggacag
ctcaatgaattgagttatgaacttccaaaaacttctcctgtatggtacatccagagcgac
tggggaataaagaaccggatacgtgaaatcatggcaggagtaagagaagaattaattatt
ttttcatcaagccctgagttactcaaggaatttaagcaggaaataaaaaaactggaaaaa
acctgtaatctaactcttatagttgatgaactggataggttcaagtcacttccttttgag
ttcaaggaaaccaataaagagtttacgaatttcatgaataacattgtaattgacggcatc
cagtataaagaagaattttttatgattgccgatggaaaggaatcaataggggttcacagc
gcaggaaacaaaagagaagcagtgataatcaaattgccgattgtttcctatatgcagaaa
atgatctatgagagggtgcttgaaccaggttttatcaaacaagacagataa
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