Methanosarcina sp. Kolksee: MSKOL_0458
Help
Entry
MSKOL_0458 CDS
T03821
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
mek
Methanosarcina sp. Kolksee
Pathway
mek03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mek00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
MSKOL_0458
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mek03400
]
MSKOL_0458
DNA repair and recombination proteins [BR:
mek03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
MSKOL_0458
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_27
AAA_29
Motif
Other DBs
NCBI-ProteinID:
AKB46235
LinkDB
All DBs
Position
complement(548943..551645)
Genome browser
AA seq
900 aa
AA seq
DB search
MTEMMTPAMRQYYEAKQAYPDTLIFFRMGDFYESFGEDAKTIAKELEITLTARGKDKSGE
RMPLAGIPYHAIDTYLPRLINKGYKVAICEQLEDPKKAKGIVKRGVVRVVTPGTAIDSSM
FSDASNNYLMAVAGREIGNSGKNAETEFEIGVSFLDISTGEFLTTQFRDSENFEKLLSEL
ARMRPSECILPSSLYRNPDLTERLRAQTIVQEFAPDISGAKEAGEKLKIHFRVATLEGMG
CENLDFAVYSAWAALEYAQTTQLRELTHINTLRTYSNSEFMILDSVTLRNLEIVKNVRDE
GDENSLYRILNSTKTPMGSRTLKKWLLKPLLSVEKINHRLDAVEELTAKPLLRYDLRNWL
SDVRDIERLVGRVVYGNSNARDLVALKKSLEALPPVRDSLIENIESTILNDIAVGLASFS
ELENLAEMIDRAIVDEPPISVREGGMIKSEYSAELAELKDIASNSKQWIANFQQKERERS
GIKSLKVGYNKVFGYYIEVTNANSSQVPDDYIRKQTMSNAERFFTPELKEKESLILTANE
KAIALEYEIFTEIVRTLSTHSRELQETAERIGTLDVLADLAEIAENNNYIRPQLTDDCKI
LIRDGRHPVVENTVHGGFVPNDTEIDCKENQFLLVTGPNMAGKSTYMRQTALIAIMAQVG
SFVPAFYASIGIIDQVFTRIGAFDDLASGQSTFMVEMVELANILNNASPRSLVLLDEIGR
GTSTYDGYSIAKAVVEFLHNRGKVGVRALFATHYHQLTALEEKLKRVKNYHVAVKEEGHE
LVFLRKIVPGATDRSYGIQVARLAGVPEKVIERANEILKELERENVLEEVEDGKNGKKRK
SKATARYTQMMLFDPGDSGGNAAKVDRPSPVETALRKLNVEEMTPIEALNKLHELKRLLD
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
atgactgaaatgatgacccctgcaatgcgccagtactacgaagccaagcaggcatatcct
gacacacttatcttcttccgtatgggagacttttatgaatcctttggggaagacgcaaaa
actattgcaaaagaactggagatcacgcttacagcccgtggcaaagacaaatcaggagag
agaatgccgcttgcaggaataccctaccatgcaattgacacttacctgccgaggctcata
aataaagggtataaagtggcaatttgcgaacagcttgaagacccgaaaaaggcgaaggga
attgtaaagcgaggggttgtaagggtagtcacacccggaacagcgattgattcgtccatg
ttttcagatgcctcaaacaattacctcatggcagtcgctgggcgagaaatcggaaactcc
ggaaagaatgccgaaaccgaatttgaaattggagtgtcgtttctcgatatttccacaggt
gaattccttacaacgcagttcagagactcggaaaattttgaaaagcttctaagcgagctt
gctcgcatgcggccgtccgaatgcattctgccttcatccctgtatagaaatccagacctt
actgaacggctgagagcccaaactattgtgcaggaatttgcccccgatatttcaggagca
aaggaagccggagaaaaattgaaaatccattttagagttgcaactcttgaaggcatgggt
tgtgagaacctggattttgcagtgtactcggcgtgggctgccctggaatatgcacagact
acgcagctgcgggaacttacccatatcaatactctgagaacctattcaaattccgaattt
atgatccttgattccgtaaccctgcggaatctcgaaattgttaaaaacgtgcgagatgaa
ggagacgaaaattccctataccgcattctgaatagcacgaaaacgccgatgggaagccgt
accctgaaaaaatggcttttgaaacccctactttccgtagaaaaaatcaaccatcgtcta
gatgctgttgaagaactgacagcaaagcctctgctccgctacgatctccggaactggctt
tcagatgtcagggatatagaacgcctcgtaggcagggtagtatatgggaactcaaacgca
agggaccttgtagccctgaaaaaatcccttgaagctctgcctcctgtccgggattccctt
atagaaaacattgaatccacaattttaaatgatattgcagtagggcttgcatcgttttcc
gagcttgaaaacctggctgaaatgatagatagagcaatagttgacgagccgccgatctca
gttcgggaaggaggcatgataaagtcagaatatagtgcagaactcgctgaactcaaggat
attgcgagcaacagcaagcagtggattgcaaattttcagcagaaggaaagagaaagaagt
ggcataaagtccctgaaagtgggatataataaggtttttgggtattatatagaggtaacc
aatgccaacagtagccaggttcctgacgattatatcagaaaacaaaccatgtcaaatgcc
gagcgcttttttacccctgaactcaaggaaaaagagagccttatcctgacagccaatgaa
aaagctatagctctcgagtatgaaatctttacagaaattgtgcggacactttcaacccat
tcaagagaacttcaggaaacagccgaaagaataggcacgcttgatgtccttgcagatctc
gctgaaatcgcagaaaataacaattatatcaggccccagcttacggatgactgcaagatt
cttatccgggatggaaggcatccggtagttgaaaacaccgtacatggcggctttgtcccg
aacgatacagaaattgactgcaaggaaaaccagtttttgctggtaacaggaccgaatatg
gcaggcaagtccacttacatgcgccagactgcgcttatagctattatggctcaggtcggt
tcttttgttcctgcattctatgcttcaatagggattattgaccaggtctttacaagaatt
ggggcatttgacgacctcgcaagtggacagagcacctttatggtagaaatggttgagctt
gcaaatatcctgaataatgcaagcccaagaagccttgtacttcttgatgagatcggcagg
ggaacgagtacctatgatgggtatagcattgcaaaagctgttgtggaattcctgcataac
agaggaaaagtaggagtaagggctctatttgcaactcattaccaccagctcacagccctt
gaagagaaattaaaaagggtcaaaaattatcatgttgcagtaaaagaagaaggtcatgag
ttagttttcctgcgaaagatcgtgccgggtgcaacagacaggagttatggaatccaggtt
gcaagacttgcaggcgtcccggaaaaggtaatagaaagggcaaatgaaattcttaaagaa
ctcgaaagagagaacgtgctcgaagaggttgaagacggcaagaacggaaaaaagagaaaa
agcaaggctacagcgcgttatacccagatgatgctttttgaccctggagacagcggcgga
aatgcagcaaaggtagacaggcccagccctgtagaaacagctcttagaaaactgaatgtg
gaagaaatgacgccaatagaagccctgaacaagcttcatgagctcaaaaggctgctggat
tga
DBGET
integrated database retrieval system
