Methanosarcina sp. Kolksee: MSKOL_0487 Help Entry MSKOL_0487        CDS       T03821                                  Name (GenBank) DNA repair helicase   KO K10844   DNA excision repair protein ERCC-2 [EC:5.6.2.3] Organism mek  Methanosarcina sp. Kolksee Pathway mek03022   Basal transcription factors mek03420   Nucleotide excision repair Brite KEGG Orthology (KO) [BR:mek00001]  09120 Genetic Information Processing   09121 Transcription    03022 Basal transcription factors     MSKOL_0487   09124 Replication and repair    03420 Nucleotide excision repair     MSKOL_0487  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:mek03021]     MSKOL_0487    03036 Chromosome and associated proteins [BR:mek03036]     MSKOL_0487    03400 DNA repair and recombination proteins [BR:mek03400]     MSKOL_0487 Enzymes [BR:mek01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      MSKOL_0487 Transcription machinery [BR:mek03021]  Eukaryotic type   RNA polymerase II system    Basal transcription factors     TFIIH      MSKOL_0487 Chromosome and associated proteins [BR:mek03036]  Eukaryotic type   Centrosome formation proteins    Spindle formation proteins     MSKOL_0487 DNA repair and recombination proteins [BR:mek03400]  Eukaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     TFIIH complex      MSKOL_0487 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Helicase_C_2 DEAD_2 DEAD ResIII Zot SLFN-g3_helicase PhoH TIP49 HBB ATPase AAA_34 OmpH HTH_56 Motif Other DBs NCBI-ProteinID:  AKB46264 UniProt:  A0A0E3Q8Y1 LinkDB All DBs Position complement(588684..590939) Genome browser AA seq 751 aa AA seqDB search MEKIHSSLLSEKIVLFEGACGTGKTLSALAPALSVGKKLNKVVIIVTNVHQQMVQFINEA REISRGNEIKTIVFKGKTSMCPENLDYEECRLKGENTYDLLDLEREVSSKEKELKDAYEK YKRTKDPALYSLRTELEKELEETKKKTRALRSNSCPELYEVLKFEGSEFSNWLFSDVRSP EEILEYAEDRDMCGYELLKKELKKAELLICNFHHVLSAEIFMMLLKWLERDPEDIILIFD EAHNIEASARSHSSTMLSELTIEKALSEVGETPESDNSFMLGKETGSGGGIPLDQDYAAR LYAKKLFTCLLAALRDTYDAKLKFGERNRLGKHWQDIQISDPYERFDILKARFLREAIKE GFSDEEKVLTRLREIGEFGGRLEEVYAENYKKGLLTVPKRSQIRYVADFLSSYLVLSDRQ NYYPILNVRRDFKSNRIAGRIELFTCIPKNVTQPLFDSIYAAVLMSATLRPFEMIKSTLG ISREVEEISYGTTFPRERRLTLAVSIPPLFAKNRDSPETLENIKEALLAATVASPGNVII YFQSYAEALRYTKLLEPELSIPILLDETGVSAQEIRKEFFKIGEQGGKALLITYLWGTLS EGVDFRDSRGRTVIIVGIGYPALNDRIKAVESAYDAVFGCGEGWEFAVQVPTIRKVRQAM GRVVRSPDDYGVRILLDSRYQGSQVRKLGKFSVFDYFPPEEKREFIDIAPRDVGSIVEEF FAHVTPNNLTKNESESQTSNRVGFGSLAEKL NT seq 2256 nt NT seq  +upstreamnt  +downstreamnt atggaaaagattcactcgtctctcctgagcgaaaaaatcgtactctttgaaggggcatgc gggacaggcaagactttaagtgcacttgcccctgcattgagtgtggggaaaaaactcaat aaagtcgttattatagtcaccaacgtccatcagcagatggttcaatttataaatgaagca agagagatttcccggggcaacgaaataaaaacaatcgttttcaagggcaagacttcaatg tgccctgaaaatctcgattacgaagaatgcaggctcaaaggggaaaatacctatgacctc cttgaccttgaaagagaagtttcttcaaaagaaaaagaactaaaggatgcctatgagaaa tacaaaaggacaaaagaccctgctctttattccctgagaactgaacttgaaaaagaactt gaagaaactaagaaaaaaactcgggctttaaggagcaattcctgcccggaactttatgaa gtactgaaatttgaaggtagtgaattttccaactggcttttttccgatgtaagaagcccg gaagaaatcctggagtatgccgaagaccgggacatgtgcgggtatgaactgctgaaaaaa gaactcaaaaaagccgaacttctaatctgcaattttcatcacgtcctcagtgctgagatt ttcatgatgctgcttaaatggcttgaacgcgaccctgaagatatcatcctaatttttgat gaagcgcataatattgaggcatctgctcgttcccattcttcaacaatgctctcggaattg actattgaaaaagccctttcggaagtaggcgagactcccgaatctgataattcttttatg ttaggtaaagaaactggttcgggaggcggcattccccttgaccaggactacgcagctcga ctatatgcgaaaaagctgtttacctgcctccttgccgctctcagggacacatatgatgcg aaattgaagtttggggaaaggaacaggcttggaaaacactggcaggacattcagatcagc gacccttatgaacgctttgacatcctgaaagctcgctttttacgggaagcgataaaggaa ggtttttcggatgaagaaaaagtcctgacccggctgcgggagattggcgagtttggagga aggctggaagaggtctatgcggaaaattacaaaaaagggctccttacagttccaaaacgt tcccagatcaggtatgttgcagactttttatcctcttacctcgtgctttctgacaggcaa aactattatccaattctgaacgtgcgcagggatttcaaaagcaatagaatcgccggcagg attgagcttttcacatgcatccctaaaaatgtgactcagcctctgtttgattccatttat gcggcagtactcatgtcggctacactccggcccttcgaaatgataaaatccacacttggc atctcaagagaagtggaagaaatttcctatggcacgacatttcccagagaaaggaggctt actcttgcggtttccatccctccgctttttgcaaagaatcgggacagcccggaaacgctt gaaaacattaaagaagccctgcttgcagctactgttgcatcgccagggaacgtgattatt tacttccagagctatgctgaagcacttcgctatactaaactccttgagcctgaactttct attcctattctccttgacgaaacaggggtttcagcccaggaaatccgaaaggagtttttc aaaataggagagcagggaggaaaagccttacttataacctatctatggggaacattgagt gaaggtgttgatttcagagattccaggggcaggaccgtgattatagtgggaatcggatat ccggccctaaacgaccgaattaaggctgtagagtctgcttatgatgcggttttcggctgt ggagaaggctgggagtttgcagtccaggtgcctacaatcaggaaagttagacaggcaatg ggaagagtggtacgttctccagacgactacggagtaaggattctccttgattcccgctac cagggctctcaggtacgtaaactcggcaaattttcggtttttgattatttcccacctgaa gaaaaaagagagtttatcgacattgcgcccagggatgtgggaagtattgtggaagaattt tttgcacacgtcacgccaaataatctcacaaaaaatgagtcggagtcccagacttcaaat cgtgtgggctttggaagcctcgctgaaaagctttga

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