Methanosarcina sp. Kolksee: MSKOL_0506
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Entry
MSKOL_0506 CDS
T03821
Name
(GenBank) Isopentenyl-diphosphate delta-isomerase, FMN-dependent
KO
K01823
isopentenyl-diphosphate Delta-isomerase [EC:
5.3.3.2
]
Organism
mek
Methanosarcina sp. Kolksee
Pathway
mek00900
Terpenoid backbone biosynthesis
mek01100
Metabolic pathways
mek01110
Biosynthesis of secondary metabolites
Module
mek_M00365
C10-C20 isoprenoid biosynthesis, archaea
mek_M00849
C5 isoprenoid biosynthesis, mevalonate pathway, archaea
Brite
KEGG Orthology (KO) [BR:
mek00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
MSKOL_0506
Enzymes [BR:
mek01000
]
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.2 isopentenyl-diphosphate Delta-isomerase
MSKOL_0506
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Gene cluster
GFIT
Motif
Pfam:
FMN_dh
IMPDH
NMO
DHO_dh
Glu_synthase
G3P_antiterm
Motif
Other DBs
NCBI-ProteinID:
AKB46283
UniProt:
A0A0E3Q8Z5
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All DBs
Position
complement(614466..615563)
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AA seq
365 aa
AA seq
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MISTTSKRKIEHLKLCAESPVESRKVSAGFEDVTLIHRALPELDMDKLNLSIDLLGKRLQ
APFLIASITGGHPDTTPVNAALAAAAEELGVGIGVGSQRAAIDDPAQEESFRVVREKAPT
AFIYGNVGAAQIRQYGIDGVEKLIEMIDADALAIHLNFLQEAIQPEGDRDATGCLEMIKE
ICSVLGKPVIIKETGAGISREDAILLQKAGVSAIDVGGAGGTSWAGVEVYRARKSGDYAS
ENLGELFWDFGIPTVASIIESRVSLPIIATGGIRTGVEIAKSIALGASAASAALPFVGPA
LEGKESVVRVISRMLDELRISMFLCGCANIQDLRNAPVVVTGWTIEYLGQRGFNVKDYAI
AGDSF
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgattagcacgacctcaaagcgaaagatcgaacatctgaaattatgtgctgaaagcccg
gttgaatcccgaaaagtcagtgcgggctttgaggatgtgaccctgatccacagggcgctt
ccggaactcgatatggataaattgaacctgtctatagaccttcttggaaaacgcctgcaa
gctccttttctgatcgcttcgattactggaggtcaccctgacactactcctgtaaatgct
gcacttgcagctgcggctgaagagctgggggtaggaattggcgttggaagccagagagct
gcaattgatgaccctgcccaggaagagtctttcagggttgtcagggaaaaagctccgact
gcttttatatacggaaatgtgggcgctgctcagattcgccagtatgggattgatggagtt
gaaaaactcatagaaatgatcgatgccgacgcccttgccattcaccttaatttcttacag
gaagccatccagccagaaggagatcgggatgcaactggctgtcttgagatgataaaagaa
atctgctccgtactgggcaagccagtaatcattaaagaaacaggagccgggatctcaagg
gaagatgccattctcctccagaaagcaggcgtgtctgcaattgatgtaggtggcgcggga
ggcacaagctgggcaggcgtcgaggtctaccgggccaggaaaagtggagattatgcctcc
gaaaaccttggagaacttttctgggactttggaattcccactgttgccagtattatagag
tccagagtctcccttccaattatcgcaaccggcgggatcaggacaggggttgagatcgca
aaatccattgctctcggagccagtgcggcaagtgcagccctgccttttgtaggccctgcc
cttgaaggaaaagaatcggttgtcagagttatttcccgcatgctggatgaactcaggatt
tcgatgtttctctgcggctgtgcaaacatacaggacctgcgtaatgcacctgtggttgtt
actggctggactattgagtatttagggcaacgtggctttaacgtaaaagactatgccata
gcaggagactcgttctga
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