Methanosarcina sp. Kolksee: MSKOL_0558
Help
Entry
MSKOL_0558 CDS
T03821
Name
(GenBank) Helicase, SNF2/RAD54 family
Organism
mek
Methanosarcina sp. Kolksee
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
DUF3670
Helicase_C
Motif
Other DBs
NCBI-ProteinID:
AKB46335
UniProt:
A0A0E3QBN0
LinkDB
All DBs
Position
679589..682900
Genome browser
AA seq
1103 aa
AA seq
DB search
MIILHAGRIGKQFFLWGESPAENEIQGARRGRKPKNPTAKPYPYDSSFENLFSALELLLG
SPGRKEAEKINVWMPTIGGNPVPSSSLVAEIPDSKAELSLAPWTVNAYSLEAEETLVLLC
ACMGKRVLAPGIISGSDLLWWADALKFAGSLVAGQKYLPGVREEEGEYRAFWEPVFSGEN
AEELAKLAKQMPPASRALAPESSAVPPEMPATLVARQFIEASLDWIVRSEIGEGFVKETR
KRKSFDSIHDAWVSALKSPDGLISGDDTELIQLEARAREWQRPLTILTTSPFRFCFRLEE
PVEDEEIEETTELEKITENKRSREEIADIEIPKGLWYVRYLLQSYEDPSLLIPVKEAWKP
KKGSPLKKYDVKNIRQFLLSSLGQAAGINAGIASSLEAPNPAGYSLDTKEAYRFLTENAV
NLSQAGFGILLPGWWTRKGTKTHLKAQAKVKGKKLQAGNGLTLDKIVSFDWEIALGDRVL
TAKELQALAKLKAPLVKVRGQWVEVNDAEIKAALEFWKKNPHGEANLREVLKLAVGVSEN
AEGLDFEGINAEGWIGELISRLKDKTGFEELPAPNGFSGTLRPYQFRGYSWLSFLRQLGI
GACLADDMGLGKTIQTLALIQYDLEQVEEGAAGREDSKLISVPNVSTAPTAPNVSNASTA
SNVSTAPNAAKPVATKPVLLVCPTSVINNWKKEAARFTPELSVMVHHGTSRKKEEEFKKE
AMKHSIVISSYGLLQRDVTFLKGVPWAGVVLDEAQNIKNPETKQAKAARALEADYRIALT
GTPVENNVGDLWSIMEFLNPGFLGSQAGFKRNFFIPIQAERDPEAARRLKEITSPFILRR
LKTDSSIISDLPEKMEMKTYCTLTKEQASLYAAVLEDIEEAIEEADEEGIQRKGIILSAL
SRLKQVCNHPAQFLKDNSGIPGRSGKLERLTEMLDVVLENGEKALVFTQFAEMGKILKEH
LQASFGCEVLFLHGGVPRKQRDRMLERFQEGKEYLPIFVLSLKAGGTGLNLTGANHVFHF
DRWWNPAVENQATDRAFRIGQTKNVEVHKFICAGTLEEKIDEIIEHKVQVAENVVGTGES
WLTELSNEELKDIFTLREEAVGE
NT seq
3312 nt
NT seq
+upstream
nt +downstream
nt
atgataattcttcatgcaggcagaattggaaaacagttcttcttatggggtgaaagcccg
gctgaaaacgaaattcagggtgcccggcgggggagaaaacctaaaaatccgacggcaaag
ccttatccttatgattcgagttttgaaaacctgttttctgctcttgagctattgctgggt
agtcctggccgaaaagaggccgaaaaaattaacgtctggatgccgactataggcgggaac
ccggttccttccagctctctggttgctgagatccctgattctaaagccgaactttcactg
gctccctggacggttaatgcatactctctggaagctgaagaaactcttgttcttctctgc
gcctgcatgggaaaacgagttttagcccctggcatcatttcaggaagtgacctactctgg
tgggcagacgcccttaaatttgcaggttcgctggtcgcaggacagaaatacctgcctgga
gtcagggaagaagaaggagagtacagggctttctgggaacccgtattttccggagaaaat
gcagaagagctggcaaagctggcaaagcaaatgcctcctgcttccagggctcttgctcct
gaatcctctgccgtgccgcctgaaatgcctgcaactttagtggcaaggcagtttattgaa
gcctctcttgactggatagtccgatccgaaataggagaagggtttgtaaaagagacgcgc
aaaagaaagtcctttgatagtatccatgatgcctgggtttctgccctgaaaagcccggac
gggctgatctctggagatgataccgaacttattcagcttgaggctcgggcccgtgaatgg
cagcgtcccctcacaatacttactacttcacctttcaggttctgttttcggctggaagaa
ccagttgaggacgaagaaatcgaagaaaccacagaactcgaaaaaatcacagaaaacaaa
agaagcagggaagagatagctgatatcgaaattcccaaagggctgtggtacgtccgctac
ctgcttcagtcttacgaggacccaagccttctgatccctgtaaaagaagcctggaagcca
aaaaagggcagcccgttgaaaaaatatgatgtgaaaaacattcgtcaatttctgttatct
tccctcgggcaggctgccggtattaatgcaggaatcgcttccagccttgaggctcccaac
ccagccggatattcccttgatacgaaagaggcttaccgtttcctgactgaaaatgcagtg
aacttaagccaggccgggtttggaatacttcttcctggctggtggactcgcaagggtaca
aaaactcacttaaaagcccaggcaaaggttaagggcaagaagttacaggccggaaacggg
cttaccctcgacaaaatcgtcagctttgactgggaaatcgcccttggggacagggtgtta
acagccaaagagttgcaggctcttgcaaaactcaaagctccacttgtgaaggttcgcggg
cagtgggttgaggtaaacgatgctgaaatcaaggctgctcttgagttctggaagaagaac
ccccatggagaagcaaacctgcgcgaggttctaaagcttgctgtgggcgtatccgaaaac
gccgaaggtctggattttgaagggatcaatgcagaaggctggattggagaattaatcagt
cgcttaaaggacaaaaccggatttgaagaacttccggctcccaatggtttttcaggaact
cttcggccttatcaattccgaggttactcatggctctcttttttgaggcaattaggcata
ggagcctgccttgcagacgacatggggcttggaaaaaccatccagacgcttgctcttatc
cagtatgacctggaacaggttgaagaaggggcagccggacgtgaagattcaaaactcatt
agcgtccctaacgtttctactgctcctactgctcctaacgtttctaacgcttctactgct
tctaatgtttctactgctcctaacgccgcaaaacctgtagccacaaaaccggtccttctg
gtctgtccgacttcggttatcaataactggaaaaaagaggctgctcgctttacacctgaa
ctttcggtaatggtacaccacggcaccagccggaaaaaagaagaggaattcaaaaaagaa
gctatgaaacatagtattgttatctcaagctatgggcttttgcagagggatgttacgttc
ttaaaaggtgttccctgggctggagtggtacttgacgaagcccagaatatcaaaaaccct
gaaactaaacaggcaaaagctgccagggctctggaagccgattaccgcatagctcttaca
gggactccggttgaaaataatgtaggcgacctctggtccatcatggagtttttaaatccc
ggcttcctcggcagtcaggccggcttcaagcggaacttctttatccccattcaggccgaa
agagacccggaagctgcaagaaggttaaaagaaattacaagtcccttcatcctgcgtcgc
ctgaagactgacagttcgatcatctctgacctgccggaaaaaatggagatgaagacctat
tgtacactgacaaaagaacaggcctcactctatgcggcagtcctcgaagatatcgaagag
gcaattgaagaagctgatgaagagggaatccagagaaaaggaataattctatctgccctt
tccaggctcaagcaggtctgcaaccatccagcacagtttttgaaggacaactccggaatt
ccaggacggtcaggaaaactcgaaaggcttaccgaaatgctggatgtggttctggaaaac
ggagaaaaagcccttgttttcacccagtttgcggaaatgggaaaaatactaaaagagcac
ctgcaggcgagcttcggctgtgaagtccttttcctgcacggcggggttcccagaaagcag
cgggaccggatgcttgagcgtttccaggagggaaaagaatatctcccgatttttgtcctc
tctcttaaagccggaggcacggggcttaaccttactggggccaatcatgtattccatttc
gaccgctggtggaacccagctgttgaaaatcaggcaactgacagggcattccgtataggt
cagacaaaaaacgtcgaggttcacaagttcatctgtgcaggcacgcttgaagaaaaaatc
gatgagattattgagcataaagtgcaggtcgcagaaaatgtcgtcgggacaggcgaatcc
tggctgacagaactttccaatgaggaattaaaggatattttcactcttagagaagaagcg
gtaggtgaataa
DBGET
integrated database retrieval system
