KEGG   Methanosarcina sp. Kolksee: MSKOL_0707
Entry
MSKOL_0707        CDS       T03821                                 
Name
(GenBank) Replication factor C large subunit
  KO
K04800  replication factor C large subunit
Organism
mek  Methanosarcina sp. Kolksee
Pathway
mek03030  DNA replication
Brite
KEGG Orthology (KO) [BR:mek00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    MSKOL_0707
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mek03032]
    MSKOL_0707
DNA replication proteins [BR:mek03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (archaeal)
    RFC (replication factor C)
     MSKOL_0707
SSDB
Motif
Pfam: AAA RCF1-5-like_lid Rad17 AAA_22 RuvB_N AAA_14 AAA_16 AAA_assoc_2 AAA_33 nSTAND3 AAA_30 RNA_helicase AAA_6 DNAX_ATPase_lid AAA_7 NACHT TsaE DUF815 IPT AAA_5 IstB_IS21 PPV_E1_C Cytidylate_kin CagA NPHP3_N AAA_28
Other DBs
NCBI-ProteinID: AKB46484
UniProt: A0A0E3QBE6
LinkDB
Position
complement(880199..882226)
AA seq 675 aa
MAIEWAEKYRPQTLKEIVGNRKAVQDLRTWAEKWLSGIPERRAVILHGPAGVGKTSTAHA
LARDLDWEVIELNASDQRTAGVIEKIAGSAASMNTLFGGKRLIILDEADNIHGTADRGGM
RAIAGIIKSTLQPIVLIANDVYGLTPTIRNLCLEIKFGSVQSRSMVPALKKVCESEEISC
SMDAVQQIAEGAGGDLRSAINDLQATATGRKTLEVEDISTSGRDVKENIFKAMQRIFKST
DCKKALEVARGLDESPEDLVHWIDENLPVQYASKDGNLEDIKTGFGYLSRADLYLGRVKK
RQNYRMWRYASMLMVCGTAVSKTRPYPGFIKYQPPSLWKKMGQIRSKRDLRDNIASKVGE
HNFESMRYSRNNLLDLYSHMLKNEESAVEITADLKLELEELIYLSGSAKASKKLQKIYDR
AQELLLEGKEEADGTEFFRAPAPSGNSKEDPSGFSVKTSKEKAEKHSEGLEVPDSRTSQV
GQKTLNFGFVVLSEISPETTNSGNDASDTFKPDNLKSDNLKSENLTLDNLKSENLKSDNL
TSDNLKSENLTLDNLKSDNLKPDNFTSDTLMPEQDQAGIDEIGLKSDSLTFSLPEHDNLK
AKNSSSLPETFEKEAFSDSEPTENSISPELSRVGKSINSEPIIKKVSDKAEKPEVKASET
PKKVESKTQKTLFDF
NT seq 2028 nt   +upstreamnt  +downstreamnt
ttggcaattgaatgggctgagaaataccgtccacagaccctgaaggagattgtagggaac
aggaaggcggtacaggatttgcggacctgggctgagaaatggctttcaggcattccagag
agaagggcagtgatccttcatgggcctgcaggagtagggaagacttctactgcccacgct
cttgcccgtgatctggattgggaagtcattgaactcaatgcaagtgaccagagaactgca
ggtgttattgaaaagattgctggatcggccgcttcaatgaatactctctttggaggaaaa
cgcctgattatcctggacgaagcggataatattcacgggactgcagacaggggcggaatg
cgggctattgcaggaattataaagagtacgcttcaacccatagtgctgattgcaaacgat
gtttatgggttgactcccactatccggaatctttgtctggaaataaagttcggctcagtg
cagagccgctcaatggttcctgctttgaagaaggtatgcgagagcgaggaaatttcatgc
agtatggatgcagtccagcaaatcgctgaaggggcgggaggcgatctaagaagtgcaatc
aacgaccttcaggctacggctacagggagaaaaactctggaagttgaggacatcagcact
tcaggcagagacgtcaaggaaaacatcttcaaggcgatgcagagaatatttaagagcacg
gactgtaaaaaggcgctggaagtagctcgcgggcttgatgaaagccctgaagaccttgta
cactggatagatgaaaacctgcctgtccagtacgcctctaaagatggaaatcttgaggat
ataaaaactggctttggttatctctccagggctgatctttatcttgggcgcgtaaaaaaa
cgccagaactataggatgtggaggtatgcgagcatgttgatggtctgcggaactgcagtc
tcaaagacacggccctaccccggatttattaagtaccagcctccttctctctggaagaaa
atggggcagatacgttcgaaacgagacctcagggataatatagcttctaaagttggagaa
cacaacttcgagtccatgcgttattcaagaaataaccttctggatctttactctcatatg
ttaaagaatgaagaatccgcagttgaaattactgcagacctcaagcttgaacttgaggaa
ttgatatatctctcgggtagcgcaaaagccagtaaaaagctgcagaaaatctatgacagg
gcgcaggaacttctccttgaaggaaaagaagaagctgatggaactgagtttttcagggct
cctgctccctcaggcaatagtaaagaagacccttctggtttctcggttaaaacctctaaa
gaaaaagctgagaaacattctgaggggcttgaagttcctgactccaggacttcccaggtc
gggcagaagactcttaactttggttttgttgtcttatctgagatttctccagaaactacg
aattctggaaatgatgcttctgataccttcaaaccggataacctaaaatcggataaccta
aaatcggaaaacctaacattagataacctaaaatcggagaacctaaaatcggataaccta
acatcagataacctaaaatcggaaaacctaacattagataacctaaaatcggataaccta
aaacctgataattttacttccgatactcttatgccggagcaggatcaggcagggattgat
gagattgggctcaaatctgatagccttacattcagtttacctgaacacgataatcttaag
gctaagaattcttcatccctgcccgagacctttgagaaggaagccttttctgactccgaa
ccgacagaaaacagcatttctcccgaattatccagagtcgggaaatctataaacagtgaa
cccattatcaaaaaagtttcagataaggctgaaaaacctgaggtcaaagccagcgaaact
cctaaaaaagtcgagtcgaaaacacaaaaaacgcttttcgacttctaa

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