Methanosarcina sp. Kolksee: MSKOL_0836
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Entry
MSKOL_0836 CDS
T03821
Name
(GenBank) tRNA pseudouridine 55 synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mek
Methanosarcina sp. Kolksee
Brite
KEGG Orthology (KO) [BR:
mek00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mek03016
]
MSKOL_0836
Enzymes [BR:
mek01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
MSKOL_0836
Transfer RNA biogenesis [BR:
mek03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MSKOL_0836
Prokaryotic type
MSKOL_0836
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Gene cluster
GFIT
Motif
Pfam:
TruB_C_2
TruB_N
PUA
DKCLD
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
AKB46613
UniProt:
A0A0E3QBA2
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All DBs
Position
complement(1059882..1060883)
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AA seq
333 aa
AA seq
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MSPAGKLPSETERTLVRKSGAWTNPSYGSYPEKRPILEYIEKGVVNIDKPKGPTSHEVAA
WVKAILGVGTAGHAGSLDPKVTGLLPALLGKATKAVPALRLSGKEYVCLLKLHKEMPQKL
VRKVCEEFTGPIYQMPPIKSAVKRVVRVRTIYYLEVLEIEGSFVLFRVGCEAGTYIRKLC
HDIGLALGCGGHMQELRRTKAGPFTEETLVTLQDLKDAYVLWKEDEDESEIRRVIMPMET
AVSHLPKIILRDSAVDAVCSGATLAVPGITSLDANLKKGELTALFTLKGELVALAKAEMS
TEELLKASTGLAATPVRIMMETGTYPRGWNKKE
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgtcacctgctggcaaattgccgtccgaaactgaaagaactctggtccggaaatccggc
gcctggacaaacccctcttacggttcttaccctgaaaagcgccctattctcgaatatatc
gagaaaggggttgtaaatattgataaaccaaaggggccgacaagccacgaggttgcagcc
tgggtaaaagctattctgggcgtaggtacggcagggcatgcaggctcacttgatcccaag
gttacagggcttttgcccgccttacttggaaaggctacaaaggcggtccctgctctgcgt
ctttctggaaaggaatacgtctgtctcttgaagcttcataaggaaatgcctcaaaaacta
gtcaggaaggtctgtgaggaatttactggccctatctaccagatgcctcctatcaaatca
gctgtcaaacgcgttgtcagggtaaggacgatctattaccttgaagtgcttgaaattgaa
gggagttttgtgctctttcgtgtaggatgcgaagccggtacttacatcaggaaactttgc
catgatattgggcttgctcttggttgcggcggacatatgcaggaactcagaaggacaaaa
gcaggcccgtttaccgaggaaacacttgtcactctccaggatctcaaagatgcatatgta
ctctggaaggaagatgaggatgagtctgaaatccggcgtgtaatcatgccaatggaaacg
gctgtatctcaccttcccaaaattatcctgcgggacagtgcagtagatgcagtctgttca
ggagctactctggcagttccgggcataacaagcctagatgcaaaccttaagaaaggagag
cttacagcgttgtttactcttaaaggtgagcttgttgcccttgcaaaggctgaaatgagt
acagaagagctcctcaaagcttcgaccggacttgcagctaccccggtccggattatgatg
gagacgggaacttatccaagaggttggaataaaaaggagtag
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